Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_P16
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001656-1|AAN71411.1|  425|Drosophila melanogaster RE45222p pro...    30   2.4  
AY122219-1|AAM52731.1|  181|Drosophila melanogaster LP10725p pro...    30   2.4  
AE013599-3942|AAF47261.1|  425|Drosophila melanogaster CG9196-PA...    30   2.4  
AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p pro...    29   4.2  
AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB...    29   4.2  
AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA...    29   4.2  
AE013599-820|AAF58970.1|  686|Drosophila melanogaster CG8024-PB,...    29   7.3  

>BT001656-1|AAN71411.1|  425|Drosophila melanogaster RE45222p
           protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 CPTDITFEPLFLVRSRSGDWRTVVQAPEKNYL-QKVRLETCKQ 519
           CP  + +      ++  G WR VVQ P + Y  Q V +  C Q
Sbjct: 256 CPAKVEYATPVFAKNYQGAWRYVVQIPYEGYFTQTVEVTRCIQ 298


>AY122219-1|AAM52731.1|  181|Drosophila melanogaster LP10725p
           protein.
          Length = 181

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 CPTDITFEPLFLVRSRSGDWRTVVQAPEKNYL-QKVRLETCKQ 519
           CP  + +      ++  G WR VVQ P + Y  Q V +  C Q
Sbjct: 12  CPAKVEYATPVFAKNYQGAWRYVVQIPYEGYFTQTVEVTRCIQ 54


>AE013599-3942|AAF47261.1|  425|Drosophila melanogaster CG9196-PA
           protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 394 CPTDITFEPLFLVRSRSGDWRTVVQAPEKNYL-QKVRLETCKQ 519
           CP  + +      ++  G WR VVQ P + Y  Q V +  C Q
Sbjct: 256 CPAKVEYATPVFAKNYQGAWRYVVQIPYEGYFTQTVEVTRCIQ 298


>AY122252-1|AAM52764.1| 1038|Drosophila melanogaster SD05989p
           protein.
          Length = 1038

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
 Frame = +1

Query: 124 AKELDKKQREKDYVPLKYPGPIQDVGNRYGSPDSGVPEECRDKNFCTIKP---PDYPQAR 294
           AK  +KKQ +K  V +          N   S  S  P+  R+ + C++KP   P  P ++
Sbjct: 138 AKLKNKKQAKKTAVAVATASSSTASSN---SSKSQTPQSTRESSVCSVKPKTVPKKPTSK 194

Query: 295 FNDMFKDT------EYEPQPNLVIEAFGDRQGDPDAEDNCPTDITFEPLFLVRSRSGDWR 456
              + + T      E EP+P    +    R  DP   DN P    ++ L +  S  G+W 
Sbjct: 195 PPKVVEVTPPPPVPEPEPEPPKRQKRLKSRL-DPGQLDNNP----WKALHMQDSSEGEWE 249

Query: 457 TVVQAPE 477
           T  ++ E
Sbjct: 250 TGSESDE 256


>AE014297-1611|AAN14338.1| 2347|Drosophila melanogaster CG7518-PB,
            isoform B protein.
          Length = 2347

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
 Frame = +1

Query: 124  AKELDKKQREKDYVPLKYPGPIQDVGNRYGSPDSGVPEECRDKNFCTIKP---PDYPQAR 294
            AK  +KKQ +K  V +          N   S  S  P+  R+ + C++KP   P  P ++
Sbjct: 1400 AKLKNKKQAKKTAVAVATASSSTASSN---SSKSQTPQSTRESSVCSVKPKTVPKKPTSK 1456

Query: 295  FNDMFKDT------EYEPQPNLVIEAFGDRQGDPDAEDNCPTDITFEPLFLVRSRSGDWR 456
               + + T      E EP+P    +    R  DP   DN P    ++ L +  S  G+W 
Sbjct: 1457 PPKVVEVTPPPPVPEPEPEPPKRQKRLKSRL-DPGQLDNNP----WKALHMQDSSEGEWE 1511

Query: 457  TVVQAPE 477
            T  ++ E
Sbjct: 1512 TGSESDE 1518


>AE014297-1610|AAF54888.2| 2451|Drosophila melanogaster CG7518-PA,
            isoform A protein.
          Length = 2451

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
 Frame = +1

Query: 124  AKELDKKQREKDYVPLKYPGPIQDVGNRYGSPDSGVPEECRDKNFCTIKP---PDYPQAR 294
            AK  +KKQ +K  V +          N   S  S  P+  R+ + C++KP   P  P ++
Sbjct: 1400 AKLKNKKQAKKTAVAVATASSSTASSN---SSKSQTPQSTRESSVCSVKPKTVPKKPTSK 1456

Query: 295  FNDMFKDT------EYEPQPNLVIEAFGDRQGDPDAEDNCPTDITFEPLFLVRSRSGDWR 456
               + + T      E EP+P    +    R  DP   DN P    ++ L +  S  G+W 
Sbjct: 1457 PPKVVEVTPPPPVPEPEPEPPKRQKRLKSRL-DPGQLDNNP----WKALHMQDSSEGEWE 1511

Query: 457  TVVQAPE 477
            T  ++ E
Sbjct: 1512 TGSESDE 1518


>AE013599-820|AAF58970.1|  686|Drosophila melanogaster CG8024-PB,
           isoform B protein.
          Length = 686

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 190 QDVGNRYGSPDSGVPEECRDKNFCTIKPPDYPQARFNDMFKDTEYEP 330
           Q V + Y + DSG  ++  ++   T      P   F D+  D E EP
Sbjct: 424 QSVASEYSNQDSGSEDDSEEQADTTEPENAKPMPAFGDLTMDQEMEP 470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,520,582
Number of Sequences: 53049
Number of extensions: 750611
Number of successful extensions: 1852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1852
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)