Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P13
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0351 - 14761728-14763086,14764742-14764957 29 2.5
02_01_0326 - 2230617-2230735,2231430-2231493,2231646-2231849,223... 29 3.3
04_04_0986 - 29931302-29932834 28 4.3
01_07_0045 - 40706873-40706956,40707083-40707253,40707585-407078... 27 7.5
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 27 7.5
04_03_0428 - 15820169-15820236,15820296-15820367,15820450-158205... 27 10.0
04_03_0418 - 15686775-15686842,15686902-15686973,15687056-156871... 27 10.0
01_03_0136 - 12897284-12897399,12897679-12897727,12898563-128986... 27 10.0
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 27 10.0
>04_03_0351 - 14761728-14763086,14764742-14764957
Length = 524
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +2
Query: 416 DAGTYALSTVLYKEMGDGNXKESLKQYQSLFKLYLXPQ----IFKVWR 547
DAG + + KE+ N L+ YQ L LY Q + +VWR
Sbjct: 237 DAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWR 284
>02_01_0326 -
2230617-2230735,2231430-2231493,2231646-2231849,
2231945-2232016,2232293-2232458,2232543-2232758,
2232873-2232949,2233056-2233151,2233237-2233280,
2233435-2233522,2233805-2233886,2233961-2234091,
2234264-2234350,2234804-2234887,2234985-2235144,
2235251-2235414,2235757-2235762,2235823-2235879,
2236159-2236278,2236387-2236496,2236587-2236689,
2236789-2236842,2237106-2237168,2237258-2237325,
2237412-2237469,2237684-2237750,2238233-2238309,
2238433-2238516,2238652-2238828,2239010-2239144
Length = 1010
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 119 YFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDGG 256
+ +N E Y+CG + D + G YL+ P ++GG
Sbjct: 326 FLRNMLEHYQCGVEMVRRDLLTGHWKPYLQRAMTLHPCYDGPINGG 371
>04_04_0986 - 29931302-29932834
Length = 510
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/71 (35%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +2
Query: 152 GAVAIYIDAICGQINEYLENITKRLPATRSKVDGGLYVG----VTGVSFMFYHLAKNLRL 319
GA A D G ++ L NI RLPA + L VTG F HL L
Sbjct: 37 GAPAQSADDAGGMCDDVLRNIFSRLPARAAVACTALSKHHRRLVTGAEFRRLHLLLGAPL 96
Query: 320 SENKSAYLAKA 352
AYLA A
Sbjct: 97 PRPHVAYLATA 107
>01_07_0045 -
40706873-40706956,40707083-40707253,40707585-40707812,
40708414-40708423,40709108-40709553
Length = 312
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 128 NPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDGGLYVGVTGVSFMFYH 298
NP++D +V + +I G EYL+ + +R+ ++++ +TG S +H
Sbjct: 141 NPFDDAPPPSVMMDRASILGDAIEYLKELLQRINDLHNELESAPSSSLTGPSSASFH 197
>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 137 EDYECGAVAIYIDAICGQ-INEYLENITKRLPATRSKVDGGLYVGVTGVSFMFYHLAKN 310
E Y V +C Q + +Y + T + S ++GG V V+ V M+ HLAK+
Sbjct: 1947 EHYSQARVKFKYGKLCLQALQQYKGDATHFVLEIISTIEGGPPVDVSSVRSMYEHLAKS 2005
>04_03_0428 -
15820169-15820236,15820296-15820367,15820450-15820519,
15824222-15824312,15825023-15825093,15825176-15825341,
15826169-15826393,15829075-15829307,15829464-15829618,
15829636-15829855
Length = 456
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 209 NITKRLPATRSKVDGGLYVGVTGVSFMFYH 298
N+T R P DGGL +G+ + YH
Sbjct: 156 NMTLRCPYITGYADGGLTMGILFTDLLHYH 185
>04_03_0418 -
15686775-15686842,15686902-15686973,15687056-15687125,
15690828-15690918,15691629-15691699,15691782-15691947,
15692775-15692999,15695681-15695913,15696070-15696224,
15696242-15696461
Length = 456
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 209 NITKRLPATRSKVDGGLYVGVTGVSFMFYH 298
N+T R P DGGL +G+ + YH
Sbjct: 156 NMTLRCPYITGYADGGLTMGILFTDLLHYH 185
>01_03_0136 -
12897284-12897399,12897679-12897727,12898563-12898661,
12898781-12898886,12899209-12899304,12899394-12899542,
12899629-12899904,12900229-12900317,12900921-12901013,
12901110-12901205,12901337-12901444,12901703-12901895,
12902608-12902639,12902997-12903066
Length = 523
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 127 KPLRRLRMWCG---CYLYRRDLWTNK*IFRKYY*ALTSYTI*SRRWSLC 264
K L+ RM+ G CY + + NK +K A TS I R+WS+C
Sbjct: 320 KRLKGTRMYSGYDPCYSSHIEDYMNKMDVQKSLHANTSGLIKDRKWSIC 368
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 27.1 bits (57), Expect = 10.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 119 YFQNPYED---YECGAV-AIYIDAICGQINEYLENITKRLPATRSKVDGGLYVGVTGVSF 286
YF Y+D +E V ++ ID G +N ++ + L + + D G Y G G S+
Sbjct: 87 YFMVQYDDILFHEKRRVTSVTIDFTFG-LNSCAGSVIRDLHIAKQEEDIGFYAGFVGASY 145
Query: 287 MF 292
MF
Sbjct: 146 MF 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,032
Number of Sequences: 37544
Number of extensions: 267793
Number of successful extensions: 580
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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