Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_P13
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z81515-6|CAB04198.1|  405|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z69659-4|CAA93487.2|  396|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81515-8|CAB54234.3|  692|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine rece...    28   5.1  
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p...    27   6.8  
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr...    27   6.8  
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote...    27   6.8  
Z81515-7|CAB04195.1|  510|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AL110482-3|CAB60336.1|  339|Caenorhabditis elegans Hypothetical
           protein Y39G8B.2 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 300 WRKICACQKINRLILQKHWNIYHLPXKCLQEI 395
           W KI   ++    +  K WN YH   +C+Q+I
Sbjct: 64  WCKIRKVRREELFLSSKIWNTYHSRNRCMQQI 95


>Z81515-6|CAB04198.1|  405|Caenorhabditis elegans Hypothetical
           protein F26H11.2e protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 438 LKAYVPASPSKKEVLSPADTXRAGDKY 358
           L A  P +  KKEV++PAD    GD Y
Sbjct: 9   LPAAKPKAEVKKEVINPADITLGGDTY 35


>Z69659-4|CAA93487.2|  396|Caenorhabditis elegans Hypothetical
           protein F07C6.4a protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/63 (22%), Positives = 25/63 (39%)
 Frame = -3

Query: 482 FPXNCRHPFLCTELCLKRTCQHPPVRRRFYLLQTLXGQVINIPVLLQDKPIYFLTGADFS 303
           FP  C+ P +C  + +    QH     R  L +     +  +P L +   +  +  + F 
Sbjct: 327 FPFTCQTPLVCRTVWMSAIAQHRFFLERKELKKVSGDLLFFLPFLFRQSVLLLVFQSPFR 386

Query: 302 PNG 294
           P G
Sbjct: 387 PGG 389


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
            F26H11.2c protein.
          Length = 2266

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 435  KAYVPASPSKKEVLSPADTXRAGDKY 358
            +A  P +  KKEV++PAD    GD Y
Sbjct: 1871 RAAKPKAEVKKEVINPADITLGGDTY 1896


>Z81515-8|CAB54234.3|  692|Caenorhabditis elegans Hypothetical
           protein F26H11.2d protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 435 KAYVPASPSKKEVLSPADTXRAGDKY 358
           +A  P +  KKEV++PAD    GD Y
Sbjct: 297 RAAKPKAEVKKEVINPADITLGGDTY 322


>U40797-8|AAL08029.1|  332|Caenorhabditis elegans Serpentine
           receptor, class u protein7 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 232 SW*ALSNIF*IFIYLSTNRVYIDSNRTTFVVFVRVLKI 119
           SW A SN   + I++ T+  Y+D     F  F+ VLKI
Sbjct: 96  SWCASSNHETLLIFILTSHFYLDYLAMGFPFFMSVLKI 133


>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
           protein F45E10.1b protein.
          Length = 1549

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
           protein F45E10.1a protein.
          Length = 1583

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
           protein F45E10.1c protein.
          Length = 1654

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
           protein F45E10.1b protein.
          Length = 1549

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
           protein F45E10.1a protein.
          Length = 1583

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
           protein F45E10.1c protein.
          Length = 1654

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
           UNC-53 protein.
          Length = 1583

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 107 KMVRYFQNPYEDYECGAVAIYIDAICGQINEYLENITKRLPATRSKVDG 253
           K +R   N + DY    V+  I+ I   INE+    TKRL    S +DG
Sbjct: 27  KSIRDISNDFRDYRL--VSQLINVIV-PINEFSPAFTKRLAKITSNLDG 72


>Z81515-7|CAB04195.1|  510|Caenorhabditis elegans Hypothetical
           protein F26H11.2f protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 423 PASPSKKEVLSPADTXRAGDKY 358
           P +  KKEV++PAD    GD Y
Sbjct: 119 PKAEVKKEVINPADITLGGDTY 140


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,122
Number of Sequences: 27780
Number of extensions: 257451
Number of successful extensions: 726
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)