Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P10
(589 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23 p... 214 2e-55
X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein pr... 214 2e-55
X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17 pro... 214 2e-55
BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein. 214 2e-55
BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23 p... 214 2e-55
BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23 p... 214 2e-55
BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal pr... 214 2e-55
AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23 p... 214 2e-55
BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein. 104 3e-22
BC114476-1|AAI14477.1| 785|Homo sapiens ANKRD28 protein protein. 31 4.0
BC113868-1|AAI13869.1| 782|Homo sapiens ANKRD28 protein protein. 31 4.0
BC106948-1|AAI06949.2| 785|Homo sapiens ANKRD28 protein protein. 31 4.0
AK126888-1|BAC86737.1| 687|Homo sapiens protein ( Homo sapiens ... 31 4.0
AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein. 31 4.0
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1... 29 9.2
AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein pr... 29 9.2
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr... 29 9.2
AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens ... 29 9.2
AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens ... 29 9.2
AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protei... 29 9.2
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein. 29 9.2
>BC062716-1|AAH62716.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (523), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVRPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>X55954-1|CAA39417.1| 140|Homo sapiens HL23 ribosomal protein
protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>X52839-1|CAA37023.1| 140|Homo sapiens ribosomal protein L17
protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BC106061-1|AAI06062.1| 140|Homo sapiens RPL23 protein protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BC104651-1|AAI04652.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BC010114-1|AAH10114.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BC003518-1|AAH03518.1| 134|Homo sapiens Similar to ribosomal
protein L23 protein.
Length = 134
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 17 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 76
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 77 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125
>AB061827-1|BAB79465.1| 140|Homo sapiens ribosomal protein L23
protein.
Length = 140
Score = 214 bits (522), Expect = 2e-55
Identities = 98/109 (89%), Positives = 106/109 (97%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 275
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKKV PAVVI
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVI 82
Query: 276 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 422
RQRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 83 RQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131
>BC034378-1|AAH34378.1| 77|Homo sapiens RPL23 protein protein.
Length = 77
Score = 104 bits (249), Expect = 3e-22
Identities = 47/53 (88%), Positives = 52/53 (98%)
Frame = +3
Query: 96 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK 254
GAVINCADNTGAKNLY+I+V+GIKGRLNRLPAAG GDM++ATVKKGKPELRKK
Sbjct: 23 GAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKK 75
>BC114476-1|AAI14477.1| 785|Homo sapiens ANKRD28 protein protein.
Length = 785
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 63 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 200
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>BC113868-1|AAI13869.1| 782|Homo sapiens ANKRD28 protein protein.
Length = 782
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 63 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 200
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 348 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 393
>BC106948-1|AAI06949.2| 785|Homo sapiens ANKRD28 protein protein.
Length = 785
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 63 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 200
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>AK126888-1|BAC86737.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ44940 fis, clone BRAMY4000915, weakly similar
to Ankyrin 1. ).
Length = 687
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 63 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 200
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 351 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 396
>AB002377-1|BAA20833.2| 1059|Homo sapiens KIAA0379 protein protein.
Length = 1059
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 63 RNSVSPWVSQXGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 200
R S S + Q GAVI+C D G L++ A G + +N L +G+
Sbjct: 324 RFSRSQTIIQSGAVIDCEDKNGNTPLHIAARYGHELLINTLITSGA 369
>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
protein.
Length = 1906
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 421 RGHRSAHSLATGPVMAEPFISPLLLTMTP 335
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477
>AL834486-1|CAD39144.1| 568|Homo sapiens hypothetical protein
protein.
Length = 568
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 421 RGHRSAHSLATGPVMAEPFISPLLLTMTP 335
+G AH L+ GP+ P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139
>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
protein.
Length = 1285
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 421 RGHRSAHSLATGPVMAEPFISPLLLTMTP 335
+G AH L+ GP+ P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856
>AK131400-1|BAD18547.1| 852|Homo sapiens protein ( Homo sapiens
cDNA FLJ16493 fis, clone CTONG3004550, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 852
Score = 29.5 bits (63), Expect = 9.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 257 YLFPEFRFTLFDCGHNHVPG 198
Y+ P F L CGHN++PG
Sbjct: 379 YIHPNFTVVLTVCGHNYMPG 398
>AK128850-1|BAC87646.1| 673|Homo sapiens protein ( Homo sapiens
cDNA FLJ46632 fis, clone TRACH2024730, weakly similar
to Homo sapiens SH3-domain binding protein 4 (SH3BP4).
).
Length = 673
Score = 29.5 bits (63), Expect = 9.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 257 YLFPEFRFTLFDCGHNHVPG 198
Y+ P F L CGHN++PG
Sbjct: 200 YIHPSFTVVLTVCGHNYMPG 219
>AJ313524-1|CAC86408.1| 852|Homo sapiens putative binding protein
7a5 protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 257 YLFPEFRFTLFDCGHNHVPG 198
Y+ P F L CGHN++PG
Sbjct: 379 YIHPSFTVVLTVCGHNYMPG 398
>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
Length = 1644
Score = 29.5 bits (63), Expect = 9.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 421 RGHRSAHSLATGPVMAEPFISPLLLTMTP 335
+G AH L+ GP+ P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,200,739
Number of Sequences: 237096
Number of extensions: 1808242
Number of successful extensions: 3959
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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