Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P09
(512 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 200 3e-51
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 200 3e-51
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 200 3e-51
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 200 3e-51
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 126 6e-29
BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein. 31 1.8
AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology dom... 31 1.8
BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein. 30 5.5
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 29 7.2
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 29 7.2
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 200 bits (487), Expect = 3e-51
Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 200 bits (487), Expect = 3e-51
Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 200 bits (487), Expect = 3e-51
Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 200 bits (487), Expect = 3e-51
Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 472
TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 126 bits (303), Expect = 6e-29
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +2
Query: 266 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 445
KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein.
Length = 576
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC*PH 234
+SC S P +K+ + QRHR + G P PP S REG P
Sbjct: 473 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 526
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 527 PWLPLTD----GRSPRRSRDPGYDH 547
>AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology domain
containing, family N member 1 protein.
Length = 611
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC*PH 234
+SC S P +K+ + QRHR + G P PP S REG P
Sbjct: 508 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS--PE 561
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 562 PWLPLTD----GRSPRRSRDPGYDH 582
>BC101387-1|AAI01388.1| 663|Homo sapiens PLEKHN1 protein protein.
Length = 663
Score = 29.9 bits (64), Expect = 5.5
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 KSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC*PH 234
+SC S P +K+ + QRHR + G P PP S REG P
Sbjct: 560 RSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSEP- 614
Query: 235 QWSQETEAACKGPSPHANQDPAYHH 309
W T+ G SP ++DP Y H
Sbjct: 615 -WLPLTD----GRSPRRSRDPGYDH 634
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 37 PXSALNNF*LKSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALT 210
P + LN+ + +S E + +G R SV QRHR TP R + P +D SY +
Sbjct: 504 PFAHLNH---RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSA 560
Query: 211 REGL 222
EGL
Sbjct: 561 IEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 37 PXSALNNF*LKSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYPPHQDHSYFSQCALT 210
P + LN+ + +S E + +G R SV QRHR TP R + P +D SY +
Sbjct: 496 PFAHLNH---RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSA 552
Query: 211 REGL 222
EGL
Sbjct: 553 IEGL 556
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,230,635
Number of Sequences: 237096
Number of extensions: 1911272
Number of successful extensions: 8032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8026
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -