Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_P05
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 188 1e-47
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 188 1e-47
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 188 1e-47
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 187 2e-47
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 185 1e-46
AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein pr... 37 0.051
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 33 0.83
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 33 0.83
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 33 0.83
X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRN... 32 1.9
AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein. 32 1.9
AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice var... 31 3.3
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 4.4
AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein. 31 4.4
BC113611-1|AAI13612.1| 797|Homo sapiens protocadherin beta 11 p... 30 7.7
BC112132-1|AAI12133.1| 797|Homo sapiens protocadherin beta 11 p... 30 7.7
AF217747-1|AAK51615.1| 797|Homo sapiens protocadherin-beta11 pr... 30 7.7
AF152490-1|AAD43751.1| 797|Homo sapiens protocadherin beta 11 p... 30 7.7
AB209225-1|BAD92462.1| 799|Homo sapiens protocadherin beta 11 p... 30 7.7
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 22 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 80
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 81 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 140
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 141 ALAASALPALVMSKGHRIEEVPELPL 166
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 158 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 194
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 188 bits (458), Expect = 1e-47
Identities = 87/146 (59%), Positives = 102/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE++PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 187 bits (456), Expect = 2e-47
Identities = 87/146 (59%), Positives = 101/146 (69%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDIVNFVHANLRKNNRQPYAVSELAGHQTSAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
+GH IE++PELPL
Sbjct: 127 ALAASALPALVMPKGHRIEEVPELPL 152
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ P P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 185 bits (450), Expect = 1e-46
Identities = 86/146 (58%), Positives = 100/146 (68%)
Frame = +1
Query: 103 VGVFREE*DGAGXQPSPSRFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 282
+ V+ E+ + +G + VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQT AES
Sbjct: 8 ISVYSEKGESSGKNVTLPA-VFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAGHQTRAES 66
Query: 283 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 462
WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 67 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126
Query: 463 XXXXXXXXXXXQARGHIIEKIPELPL 540
++GH IE+ PELPL
Sbjct: 127 ALAASALPALVMSKGHRIEEFPELPL 152
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 515 LKRFPSFPWVVADKVQEINKTKQAVIFLXRLKAWSDI 625
++ FP P VV DKV+ KTK+AV+ L +LKAW+DI
Sbjct: 144 IEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDI 180
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSET 130
++VARPL+SVYSEK E+
Sbjct: 1 MAVARPLISVYSEKGES 17
>AL133009-1|CAB61353.1| 158|Homo sapiens hypothetical protein
protein.
Length = 158
Score = 37.1 bits (82), Expect = 0.051
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1
Query: 501 SLNERWDASSSNGCCQGRSPLSEVDATVPAPPGL 400
+L +W S+G C G SPLS A PAPPGL
Sbjct: 106 ALPGKWHLLLSSGLCGGNSPLSGNGAVCPAPPGL 139
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 376 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 376 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 376 HDTCYRRHPD--RTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HDT +R+HP +G+H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
Score = 32.3 bits (70), Expect = 1.4
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 379 HHDTCYRRHPDRTYGYHHHGHAEFGQQ-HVRYPMIRHWFGDQPPC 248
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>X16666-1|CAA34656.1| 301|Homo sapiens protein ( Human HOX2I mRNA
from the Hox2 locus. ).
Length = 301
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 520 KIPELPLGCSRQSPGDQQDQTGCHLPXAPQGMV 618
++P P GC +++ GD DQ+ C P A V
Sbjct: 267 RVPPAPPGCPKEAAGDASDQSTCTSPEASPSSV 299
>AF287350-1|AAG31762.1| 108|Homo sapiens homeobox B1 protein.
Length = 108
Score = 31.9 bits (69), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 520 KIPELPLGCSRQSPGDQQDQTGCHLPXAPQGMV 618
++P P GC +++ GD DQ+ C P A V
Sbjct: 74 RVPPAPPGCPKEAAGDASDQSTCTSPEASPSSV 106
>AJ277505-1|CAC14585.1| 1107|Homo sapiens MUC4 protein splice variant
sv11 protein.
Length = 1107
Score = 31.1 bits (67), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 523 IPELPLGCSRQSPGDQQDQTGCHLPXAPQG 612
+PE PL R+ PG +Q+ G HLP G
Sbjct: 1068 LPESPLWGRRRGPGVRQEDRGLHLPTLQAG 1097
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.7 bits (66), Expect = 4.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 211 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 384
++++ +RQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
>AF044309-1|AAC24031.1| 287|Homo sapiens syntaxin 11 protein.
Length = 287
Score = 30.7 bits (66), Expect = 4.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 399 EALAALAPSRQPPTAESGLGSSRCCYWRPSAR 494
E L A R PPT S ++ CC WR + R
Sbjct: 191 ENLLADVKGRGPPTTRSRAATANCCAWRAAIR 222
>BC113611-1|AAI13612.1| 797|Homo sapiens protocadherin beta 11
protein.
Length = 797
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 603 RXRKMTACLVLLIS-WTLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPL 439
R + L+L++S W L + T G++ F++ S + + ++ + +G R+PL
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
>BC112132-1|AAI12133.1| 797|Homo sapiens protocadherin beta 11
protein.
Length = 797
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 603 RXRKMTACLVLLIS-WTLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPL 439
R + L+L++S W L + T G++ F++ S + + ++ + +G R+PL
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
>AF217747-1|AAK51615.1| 797|Homo sapiens protocadherin-beta11
protein.
Length = 797
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 603 RXRKMTACLVLLIS-WTLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPL 439
R + L+L++S W L + T G++ F++ S + + ++ + +G R+PL
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
>AF152490-1|AAD43751.1| 797|Homo sapiens protocadherin beta 11
protein.
Length = 797
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 603 RXRKMTACLVLLIS-WTLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPL 439
R + L+L++S W L + T G++ F++ S + + ++ + +G R+PL
Sbjct: 252 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 307
>AB209225-1|BAD92462.1| 799|Homo sapiens protocadherin beta 11
precursor variant protein.
Length = 799
Score = 29.9 bits (64), Expect = 7.7
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 603 RXRKMTACLVLLIS-WTLSATTQGKLGNLFNNVSSSLNERWDASSSNGCCQGRSPL 439
R + L+L++S W L + T G++ F++ S + + ++ + +G R+PL
Sbjct: 254 RENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGEITLRAPL 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,851,572
Number of Sequences: 237096
Number of extensions: 2146432
Number of successful extensions: 6618
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6569
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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