Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_O23
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 206 8e-54
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 107 9e-24
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 107 9e-24
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 98 4e-21
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 89 3e-18
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 89 3e-18
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 87 1e-17
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 86 2e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 81 9e-16
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 78 6e-15
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 74 8e-14
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 66 3e-11
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 65 5e-11
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 64 6e-11
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 64 6e-11
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 61 6e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 60 2e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 2e-08
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 55 5e-08
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 45 4e-05
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 39 0.003
Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical ... 32 0.41
AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical ... 32 0.41
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 5.0
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 28 6.6
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 206 bits (504), Expect = 8e-54
Identities = 81/136 (59%), Positives = 116/136 (85%)
Frame = +3
Query: 222 MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAE 401
M+ATRRLQKEL D++ G+K++ +++ +E+N+L W L++PD PYNKGAF++ I FP +
Sbjct: 1 MSATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGAFKVGITFPVD 60
Query: 402 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHP 581
YPFKPPK++F+TKIYHPN+DE+G+ CLPI++AENWKPATKT+QV+ AL++L+N+PEP HP
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHP 120
Query: 582 LRAELAEEFSKIGRNF 629
+RA++AEEF K + F
Sbjct: 121 IRADVAEEFQKDHKKF 136
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 107 bits (256), Expect = 9e-24
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 404
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 405 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 584
PFKPPK++F T+IYHPNI+ G +CL I+ ++ W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
Query: 585 RAELA 599
E+A
Sbjct: 120 VPEIA 124
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 107 bits (256), Expect = 9e-24
Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 404
A +R+QKEL D+ + V + ++ WQ I+ P PY G F + I+FP +Y
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 405 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 584
PFKPPK++F T+IYHPNI+ G +CL I+ ++ W PA +V+ ++ +L+ DP P+ PL
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRSQ-WSPALTISKVLLSICSLLCDPNPDDPL 119
Query: 585 RAELA 599
E+A
Sbjct: 120 VPEIA 124
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Frame = +3
Query: 303 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVC 479
DESN + +I PD+ P+ G F++E+ P EYP PK+ F TKIYHPNID+ G++C
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRIC 88
Query: 480 LPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 608
L I+ + W PA + V+ ++ AL++ P PE PL ++AE++
Sbjct: 89 LDILK-DKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQW 130
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 219 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 395
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 396 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPE 575
EYP KPP + F +K++HPN+ G +CL I+ W P ++ ++ +L+++P P
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPN 119
Query: 576 HPLRAELAEEFSKIGRNFKE 635
P + A+ + + R +++
Sbjct: 120 SPANSLAAQLYQENRREYEK 139
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 219 TMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFP 395
T + RRL ++ +++ E NILTW+ +I P P+ G F++ + F
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 396 AEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPE 575
EYP KPP + F +K++HPN+ G +CL I+ W P ++ ++ +L+++P P
Sbjct: 61 EEYPNKPPTVKFISKMFHPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPN 119
Query: 576 HPLRAELAEEFSKIGRNFKE 635
P + A+ + + R +++
Sbjct: 120 SPANSLAAQLYQENRREYEK 139
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Frame = +3
Query: 237 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 416
R++KE+ D+ ++ + +D + E +Q I+ D Y F + ++ EYPFKP
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIGDGVLYKNMIFTLTLDVNVEYPFKP 76
Query: 417 PKISFKTKIYHPNIDE-KGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAE 593
P + F +YHPN+D ++C P++ ENWKP T + V+ L+ L+N+P+ P+ +
Sbjct: 77 PYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSRPVNID 136
Query: 594 LAEEF 608
A ++
Sbjct: 137 AAHDY 141
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 17/150 (11%)
Frame = +3
Query: 240 LQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKP 416
L+K+L D+R+ + F VD+++I W+ L++ P + Y G F+ ++FP +YP KP
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 417 PKISFKTKIYHPNIDEKGQVCLPII------------SAENWKPATKTDQVIQALVALVN 560
PK+ F ++I+HPNID++G VC+ I+ E W P + ++ ++++++
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 561 DPEPEHPLRAELA----EEFSKIGRNFKEC 638
DP E P + A E +++ + +C
Sbjct: 128 DPNFESPANVDAAKMQRENYAEFKKKVAQC 157
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ-GLIVPDNPPYNKGAFRIEINFPAEY 404
A R L EL +++ ++ F I V+E N+ W G+ P Y G F+ I FP+ Y
Sbjct: 11 ALRALTMELKNLQSQPVEGFT-IDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNY 69
Query: 405 PFKPPKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTDQVIQALV 548
P+ PP + F TK++HPN+ E G +C+ I ++ E W P ++ +++
Sbjct: 70 PYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVI 129
Query: 549 ALVNDPEPEHPLRAELAEEFSK 614
+L+N+P P + + + K
Sbjct: 130 SLLNEPNTSSPANVDASVMYRK 151
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 80.6 bits (190), Expect = 9e-16
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVD--ESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 398
A RLQ+E ++ + S I ++ N+ +G I P + PY G F ++I P
Sbjct: 5 AFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPD 64
Query: 399 EYPFKPPKISFKTKIYHPNI-DEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPE 575
+YPF PP + F TKI+HPN+ + G +CL I+ + W + V+ ++ AL+ PEP+
Sbjct: 65 QYPFSPPNVKFSTKIWHPNVSSQTGVICLDILK-DQWAASLTLRTVLLSIQALMCTPEPK 123
Query: 576 HPLRAELAEEFSKIGRNFK 632
P A +A+++ + FK
Sbjct: 124 DPQDAVVAKQYMEKPAVFK 142
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 77.8 bits (183), Expect = 6e-15
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 404
A +RL E ++ + +DE N W+ LI P+ + G F I FP +Y
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDY 64
Query: 405 PFKPPKISFKTKIYHPNIDEKGQVCLPIISA------------ENWKPATKTDQVIQALV 548
P PPK+ F I+HPNI G+VC+ I+ A E W P ++++ ++V
Sbjct: 65 PLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVV 124
Query: 549 ALVNDPEPEHPLRAELAEEFSKIGRNFKE 635
+++ +P E P A+ + + F++
Sbjct: 125 SMLAEPNDESPANVSAAKMWREDRAQFEK 153
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 74.1 bits (174), Expect = 8e-14
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Frame = +3
Query: 207 SKFCTMAATRRLQKELN--DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFR 377
S TR+ ++ N DI ++G+ +++ E+N++ +G I P+ PY G F
Sbjct: 16 SNLALARVTRKCKEVANASDITEAGIH----VEIKENNLMDIKGFIKGPEGTPYAGGTFE 71
Query: 378 IEINFPAEYPFKPPKIS---------------FKTKIYHPNI-DEKGQVCLPIISAENWK 509
I+++ P YPF+PPK++ F T+I+HPNI + G +CL I+ + W
Sbjct: 72 IKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILK-DKWT 130
Query: 510 PATKTDQVIQALVALVNDPEPEHPLRAELAEEF 608
+ V+ +L A++ PEP P A +A++F
Sbjct: 131 ASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQF 163
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Frame = +3
Query: 342 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 518
P + Y G +RI ++ P +YPFK P I F KI+HPNIDE G VCL +I+ + W
Sbjct: 42 PKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN-QAWTALY 100
Query: 519 KTDQVIQA-LVALVNDPEPEHPLRAELA 599
+ L L+ P PL E A
Sbjct: 101 DLTNIFDTFLPQLLTYPNAADPLNGEAA 128
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 65.3 bits (152), Expect = 4e-11
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Frame = +3
Query: 336 IVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAEN---- 503
+ P Y G FR +I P EY PP + TK++HPNI+E G +CL I+ +
Sbjct: 65 VTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQY 124
Query: 504 -WKPATKTDQVIQALVALVND 563
W+P V+ LV+L ND
Sbjct: 125 GWRPTRNLTDVVHGLVSLFND 145
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 64.9 bits (151), Expect = 5e-11
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Frame = +3
Query: 225 AATRRLQKELNDIRQSGLKSFRDIQVDESNILT-WQ-GLIVPDNPPYNKGAFRIEINFPA 398
AATRRL KEL ++ + SN L W+ G++ + Y F ++ F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 399 EYPFKPPKISF--KTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALV-NDPE 569
+YPF P++ F +T HP+I G +CL I+S ++W PA V ++++++ + E
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILS-DDWTPALSVQSVCLSILSMLSSSKE 122
Query: 570 PEHPL 584
+HP+
Sbjct: 123 KKHPI 127
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +3
Query: 312 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 488
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+ G VCL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 489 ISA-ENWKPATKTDQVIQALVALVNDPEPEHPLRAE 593
+ ++WKP+ Q++ + L+N P E P +AE
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAE 132
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +3
Query: 312 NILTWQGLIVPDNPP-YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI 488
N+ W+ I + G +RI + F ++P PPK F+ ++HPN+ G VCL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 489 ISA-ENWKPATKTDQVIQALVALVNDPEPEHPLRAE 593
+ ++WKP+ Q++ + L+N P E P +AE
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAE 132
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 61.3 bits (142), Expect = 6e-10
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Frame = +3
Query: 231 TRRLQKELNDIRQS-GLKSFRDIQV--DESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 398
T+R+ KEL I + L + I V DE + + LI PD+ PY G F +I FP
Sbjct: 411 TKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPT 470
Query: 399 EYPFKPPKISFKTK-----IYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVND 563
YPF PPK +F T ++PN+ G++CL I+ +P K + + LV+
Sbjct: 471 GYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVLVSI 530
Query: 564 PE 569
E
Sbjct: 531 QE 532
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Frame = +3
Query: 150 QLIDLNFKKE----YLWNILGHFSKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNI 317
Q +DL++ +E L+++ + +F T + +K D R + + I + ++I
Sbjct: 8 QYVDLSYFRETADALLFDVETNSREFTNEINTVKEEKAKWDERTPQGYTAKPISFEGADI 67
Query: 318 -LTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPII 491
+W + P P+ G + + +NF ++P PP FKT ++HPN+D +G + L ++
Sbjct: 68 WCSWICTVPGPRGSPWEGGEYEVSVNFH-KWPIIPPICEFKTPLHHPNVDLRGSIYLKML 126
Query: 492 SAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFSKIGRNFK 632
E+W T ++++ + L+ P+ E E+ N++
Sbjct: 127 EQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRENYE 173
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 228 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 404
A +RL+K+ + + + + + E+NIL W+ +I+ PY G + ++ FP ++
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 405 PFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALVNDPEP 572
PFKPP I T + ++CL I + W PA +I L++ +ND +P
Sbjct: 68 PFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMNDNQP 123
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Frame = +3
Query: 327 QGLIVP-DNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAE 500
QG+I + PY G F ++I YPFK P + F TKI+HP++ G +CL +
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 501 NWKPATKTDQVIQALVALVNDPEPEHPLRAELAEE 605
W + +V+ + + +++ + P+ E+ E+
Sbjct: 442 VWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQ 476
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 225 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPD-NPPYNKGAFRIEINFPAE 401
A RRL KE ++RQ Q E N+ W I + G + I FPA+
Sbjct: 10 AGVRRLMKEAMELRQP--TEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPAD 67
Query: 402 YPFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVIQALVALV 557
YP KPP + T +++K VCL I E W P+ + AL+ +
Sbjct: 68 YPMKPPNLILLTPNGRFELNKK--VCLSISGYHPETWLPSWSIRTALLALIGFL 119
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 342 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQV 476
P + PY G F +++ FP YP P+I F+T I++ ++ GQV
Sbjct: 38 PADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQV 83
>Z98877-7|CAB63403.1| 292|Caenorhabditis elegans Hypothetical
protein Y69H2.6 protein.
Length = 292
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 309 SNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP--PKISF-KTKIYHPNIDEKG-QV 476
+N W G+I + G FR I+ P E+P P++ F ++ ++HP I K ++
Sbjct: 46 NNKFLWFGVIFVRKGIFGGGIFRFNIHIPLEFPDASDLPRVIFEQSNLFHPLICTKSKEL 105
Query: 477 CLPIISAENWK 509
CL E WK
Sbjct: 106 CLNRSFPEGWK 116
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 294 IQVDESNILT-WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEK 467
++ D LT W I+ P PY + ++I YP +PP + F TK++ +++
Sbjct: 30 LEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQS 89
Query: 468 GQVC--LPIISAENWKPATKTDQVIQ 539
V + + NW + V++
Sbjct: 90 NGVIDKRNLTTLRNWSNSYMIKTVLE 115
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 294 IQVDESNILTWQGLIV-PDNPPYNKGAFRIEINF-PAEYPFKPPKISFKTKIYHPNIDEK 467
+++DE+ L + +I P Y G F +IN P + P++ F T I+HPN+ +
Sbjct: 54 MRIDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKY 113
Query: 468 G 470
G
Sbjct: 114 G 114
>AF101304-2|AAN60536.1| 1123|Caenorhabditis elegans Hypothetical
protein C02E11.1b protein.
Length = 1123
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 351 PPYNKGAFRIEINFPAEYPFKPPKISFK 434
P YNKG + ++++ PA Y F+P I K
Sbjct: 67 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 94
>AF101304-1|AAC69200.2| 1121|Caenorhabditis elegans Hypothetical
protein C02E11.1a protein.
Length = 1121
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 351 PPYNKGAFRIEINFPAEYPFKPPKISFK 434
P YNKG + ++++ PA Y F+P I K
Sbjct: 65 PVYNKGHYTLKVSAPAGYYFEPDSIEIK 92
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.2
Identities = 29/133 (21%), Positives = 60/133 (45%), Gaps = 22/133 (16%)
Frame = +3
Query: 219 TMAATRRLQKELNDIRQS-----GLKSFRDIQVDESNILTWQGL--IVPDNP-------- 353
++ AT RL KE+ DI +S G+ +F +++ +E+ W L + D+P
Sbjct: 212 SITATDRLMKEIRDIHRSEHFKNGIYTF-ELEKEENLYQWWIKLHKVDEDSPLFEDMKKL 270
Query: 354 --PYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEK-----GQVCLPIISAENWKP 512
+N+ F ++P PP + ++ P+I++ G +C+ +++ + W
Sbjct: 271 KKDHNQDHLLFSFTFNEKFPCDPPFV----RVVAPHINQGFVLGGGAICMELLTKQGWSS 326
Query: 513 ATKTDQVIQALVA 551
A + I + A
Sbjct: 327 AYSIESCILQIAA 339
>Z81473-5|CAB03893.2| 139|Caenorhabditis elegans Hypothetical
protein C17D12.5 protein.
Length = 139
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 351 PPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPAT 518
PPY + + + + P ++PF PP I+ KT +K L + WKP+T
Sbjct: 46 PPYTE--YIVTVAIPPKFPFSPPAITCKT--------DKNMKFL-FLEENQWKPST 90
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/83 (22%), Positives = 32/83 (38%)
Frame = +3
Query: 336 IVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPA 515
+ ++PP A + P P PPK+ K H E+ ++ + KP
Sbjct: 547 LTEEDPPEESAAAAAPEDVPDAAPEDPPKVILKPTPPHRMTQEEKNAHFARLTTDKEKPT 606
Query: 516 TKTDQVIQALVALVNDPEPEHPL 584
+ T ++ A + P P PL
Sbjct: 607 SST-SILPQDAAPPHVPPPPPPL 628
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 27.9 bits (59), Expect = 6.6
Identities = 28/133 (21%), Positives = 60/133 (45%), Gaps = 22/133 (16%)
Frame = +3
Query: 219 TMAATRRLQKELNDIRQS-----GLKSFRDIQVDESNILTWQGL--IVPDNP-------- 353
++ A+ RL KE+ DI +S G+ +F +++ +E+ W L + D+P
Sbjct: 212 SITASDRLMKEIRDIHRSEHFKNGIYTF-ELEKEENLYQWWIKLHKVDEDSPLFEDMKKL 270
Query: 354 --PYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEK-----GQVCLPIISAENWKP 512
+N+ F ++P PP + ++ P+I++ G +C+ +++ + W
Sbjct: 271 KKDHNQDHLLFSFTFNEKFPCDPPFV----RVVAPHINQGFVLGGGAICMELLTKQGWSS 326
Query: 513 ATKTDQVIQALVA 551
A + I + A
Sbjct: 327 AYSIESCILQIAA 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,740,301
Number of Sequences: 27780
Number of extensions: 314830
Number of successful extensions: 706
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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