Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_O21
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small nu...    31   2.2  
AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small nu...    31   2.2  
AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.       31   2.2  
AF067802-1|AAF75562.1|  184|Homo sapiens HDCMB12P protein.             30   5.1  
BC056911-1|AAH56911.1|  235|Homo sapiens dual specificity phosph...    29   8.9  
AL160175-13|CAI12819.1|  235|Homo sapiens dual specificity phosp...    29   8.9  

>BC005182-1|AAH05182.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein, (yeast) protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 192 KKRQKKYDIKHLIISTTKFGFVFQEKLILRSLQMDKTDK-KCKKNGLTKP 338
           K+RQK+Y+     I   K  FV  +K+  R   MDKT K K KK  +  P
Sbjct: 193 KERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP 242


>AL603790-7|CAH69932.1|  253|Homo sapiens UTP11-like, U3 small
           nucleolar ribonucleoprotein,e protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 192 KKRQKKYDIKHLIISTTKFGFVFQEKLILRSLQMDKTDK-KCKKNGLTKP 338
           K+RQK+Y+     I   K  FV  +K+  R   MDKT K K KK  +  P
Sbjct: 193 KERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP 242


>AF151852-1|AAD34089.1|  253|Homo sapiens CGI-94 protein protein.
          Length = 253

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 192 KKRQKKYDIKHLIISTTKFGFVFQEKLILRSLQMDKTDK-KCKKNGLTKP 338
           K+RQK+Y+     I   K  FV  +K+  R   MDKT K K KK  +  P
Sbjct: 193 KERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP 242


>AF067802-1|AAF75562.1|  184|Homo sapiens HDCMB12P protein.
          Length = 184

 Score = 30.3 bits (65), Expect = 5.1
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 192 KKRQKKYDIKHLIISTTKFGFVFQEKLILRSLQMDKTDK-KCKKNGLTKP 338
           K+RQK+Y+     I   K  FV  +K+  R   MDKT K K KK  +  P
Sbjct: 124 KERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNFP 173


>BC056911-1|AAH56911.1|  235|Homo sapiens dual specificity
           phosphatase 15 protein.
          Length = 235

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 321 NGLTKPITTLELAKDITAIDLSNKGISELTHNITLPE 431
           NG+TK +  L L   I A DL   G +++TH I++ E
Sbjct: 3   NGMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHE 39


>AL160175-13|CAI12819.1|  235|Homo sapiens dual specificity
           phosphatase 15 protein.
          Length = 235

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 321 NGLTKPITTLELAKDITAIDLSNKGISELTHNITLPE 431
           NG+TK +  L L   I A DL   G +++TH I++ E
Sbjct: 3   NGMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHE 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,849,378
Number of Sequences: 237096
Number of extensions: 1092810
Number of successful extensions: 1527
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)