Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_O16
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein. 55 2e-07
BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified ... 55 2e-07
BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified ... 55 2e-07
BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein. 55 2e-07
BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein. 55 2e-07
AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein. 55 2e-07
AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein. 55 2e-07
BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 48 1e-05
BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C. e... 48 1e-05
AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein. 48 1e-05
>CR407612-1|CAG28540.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>BT007112-1|AAP35776.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>BC030821-1|AAH30821.1| 286|Homo sapiens glioblastoma amplified
sequence protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>BC001837-1|AAH01837.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>BC000732-1|AAH00732.1| 286|Homo sapiens GBAS protein protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>AJ001259-1|CAA04633.1| 285|Homo sapiens NIPSNAP2 protein protein.
Length = 285
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 33 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 92
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 93 QEVLPKIHEDK 103
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 99 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 132
>AF029786-1|AAC29002.1| 286|Homo sapiens GBAS protein.
Length = 286
Score = 54.8 bits (126), Expect = 2e-07
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Frame = +1
Query: 175 STSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNYLKNY 348
++S+ + +D W L VR+++P K++HS +L+ KE +Y L HN++P+ ++ Y K
Sbjct: 34 TSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKETSNLYKLQFHNVKPECLEAYNKIC 93
Query: 349 KQHVDLIHSHK 381
++ + IH K
Sbjct: 94 QEVLPKIHEDK 104
Score = 42.3 bits (95), Expect = 0.001
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
IH ++ C LVG+W G+ DQA+HL++Y GG
Sbjct: 100 IHEDKHYPCTLVGTWNTWYGEQDQAVHLWRYEGG 133
>BC006473-1|AAH06473.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 193 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNY 336
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAY 87
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
+H ++ C LVG+W G+ DQA+HL+++ GG
Sbjct: 98 LHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGG 131
>BC002371-1|AAH02371.1| 284|Homo sapiens nipsnap homolog 1 (C.
elegans) protein.
Length = 284
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 193 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNY 336
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAY 87
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
+H ++ C LVG+W G+ DQA+HL+++ GG
Sbjct: 98 LHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGG 131
>AJ001258-1|CAA04632.1| 284|Homo sapiens NIPSNAP1 protein protein.
Length = 284
Score = 48.4 bits (110), Expect = 1e-05
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = +1
Query: 193 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEV--IYALHTHNIRPDSVDNY 336
+ + WF L V +++P K++HS +LS KE +Y + HN++P+ +D Y
Sbjct: 38 DNEGSWFRSLFVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPEYLDAY 87
Score = 40.7 bits (91), Expect = 0.003
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 371 IHTKQNLGCELVGSWTVSVGDMDQALHLFKYVGG 472
+H ++ C LVG+W G+ DQA+HL+++ GG
Sbjct: 98 LHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGG 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,055,466
Number of Sequences: 237096
Number of extensions: 1182656
Number of successful extensions: 2305
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2295
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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