Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_O16
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   10.0 

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 383 QNLGCELVGSWTVSVGD 433
           Q L CE+ GS  V +GD
Sbjct: 189 QLLSCEVNGSTLVYIGD 205


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 407 LQAHNPSSAL 378
           LQ HNPSS L
Sbjct: 205 LQGHNPSSGL 214


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 220  LLVRRIEPTKESHSRMLSDKEVIYALHTHNIRPDSVDN 333
            L+  R    K+S  +      V  A    NIRP + DN
Sbjct: 1085 LMRPRKRDQKQSDDKTKETSTVTAAAAATNIRPGTADN 1122


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 418 CP*SYKLTTQVLLCVNVLDLHA 353
           CP   KL +  L+CV    +H+
Sbjct: 64  CPDGLKLLSDGLMCVEKDSIHS 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,555
Number of Sequences: 438
Number of extensions: 2643
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)