Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_O14
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 200 1e-52
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 132 4e-32
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 100 2e-22
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 100 3e-22
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 98 1e-21
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 97 2e-21
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 93 4e-20
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 36 0.003
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 32 0.057
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 29 0.53
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 27 2.8
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 26 3.7
SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces po... 26 3.7
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 26 4.9
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 8.6
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 8.6
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 200 bits (489), Expect = 1e-52
Identities = 93/150 (62%), Positives = 114/150 (76%)
Frame = +2
Query: 104 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 283
MFRNQYD D T WSPQGRLHQVEYA+EA+K GSAT+GL +K +AVL+ALKR ELS+YQ
Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQ 60
Query: 284 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 463
KK+I ID+HIGI+I+GL DAR+LS YM+ E L+ + P+PV RL+S V K QI T
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINT 120
Query: 464 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPS 553
Q Y +RP GVG LV GYD+ GPH+ + PS
Sbjct: 121 QEYGRRPYGVGFLVIGYDESGPHLLEFQPS 150
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 132 bits (319), Expect = 4e-32
Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 8/161 (4%)
Frame = +2
Query: 104 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SA 277
M R++YD V +SP+GRL QVEYA+EA+KLGS IG+K KD VL KR S L S
Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESH 62
Query: 278 YQKKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGN---- 445
+K+ ID HIG +ISGLTADAR + + R + NHR+++D P + S+ +
Sbjct: 63 SVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALR 122
Query: 446 --KMQICTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANY 562
+ + +R RP GV LL+AG D+ GP +Y + PS Y
Sbjct: 123 FGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTY 163
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 100 bits (239), Expect = 2e-22
Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 4/152 (2%)
Frame = +2
Query: 119 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ--KKI 292
YD ++V+SP GRL QVEY EAV+ G+ I L+ + V+ ++ V +L +KI
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 293 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 472
+D H+ ++ +GL ADAR+L R E NH+ + P+ + L V Q TQ
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 473 DKRPLGVGLLVAGYD--DQGPHIYQTCPSANY 562
RP GV L+AG+D D P +YQT P+ Y
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIY 155
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 99.5 bits (237), Expect = 3e-22
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = +2
Query: 119 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ---KK 289
YDS T++SP+GRL+QVEYA+EA+ +G+ KD VL A K+ S+L + +K
Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEK 64
Query: 290 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 469
+ I +++ +++GLTADA +L Y R + + + MP +L+ V + Q TQ
Sbjct: 65 LYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQY 124
Query: 470 YDKRPLGVGLLVAGYDD-QGPHIYQTCPSANY 562
RP GV L AG+D +G ++Q+ PS NY
Sbjct: 125 GGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNY 156
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 97.9 bits (233), Expect = 1e-21
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Frame = +2
Query: 119 YDSDVTVWSPQGRLHQVEYAMEAVK-LGSATIGLKNKDYAVLIALKRAVSEL--SAYQKK 289
+D +TV+SP+GRL+QVEYA +A G ++G+ K+ A +I+ K+ +L ++ K
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 290 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 469
+ PI + IG ++G ADAR R+E Y + PMP L + N Q+ TQR
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQR 126
Query: 470 YDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANYL 565
RPLGV + + DD+ GP +++ P+ Y+
Sbjct: 127 AAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYI 159
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 97.1 bits (231), Expect = 2e-21
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
Frame = +2
Query: 113 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELS--AYQK 286
++Y +T +SP G+L Q+EYA+ AV G ++G+K D VL K+ SEL+ A +
Sbjct: 3 DKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLE 62
Query: 287 KIIPIDEHIGISISGLTADARML-SRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 463
K+ I IG+ SG+ D R+L + + ++ ++ P L+ + + MQ T
Sbjct: 63 KVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQEST 122
Query: 464 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANY 562
Q RP GV LLVAG D++GP +YQ PS Y
Sbjct: 123 QSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTY 155
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 92.7 bits (220), Expect = 4e-20
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Frame = +2
Query: 140 WSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKKIIPIDEHI 313
+SP GRL Q EYA +AV+ S IG+K +D +L K S+L +I +D HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 314 GISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGV 493
GI+ +G D + + + R E + R ++ +P+P + +GN +Q+ T RP GV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 494 GLLVAGYDDQGPHIYQTCPSANY 562
VA YD +GPH+Y P+ Y
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVY 156
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 36.3 bits (80), Expect = 0.003
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +2
Query: 188 VKLGSATIGLKNKDYAVLIALKRAVSELSAY-----QKKIIPIDEHIGISISGLTADARM 352
+++G+ L+ KD +L A R + AY K+ + ++I SG AD +
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTT--MGAYIANRVTDKLTQLTDNIWCCRSGSAADTQT 78
Query: 353 LSRYMRTECLNHR--YSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQ- 523
++ ++ +R + HD + ++S ++C Q +K L GL+VAGYD++
Sbjct: 79 VADLLKYYLSMYRIQFGHDPSVHTAATLAS-----EMCYQ--NKNMLSAGLIVAGYDEKT 131
Query: 524 GPHIY 538
G +Y
Sbjct: 132 GGDVY 136
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 32.3 bits (70), Expect = 0.057
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Frame = +2
Query: 182 EAVKLGSATIGLKNKDYAVLIALKRAVS-ELSAYQ--KKIIPIDEHIGISISGLTADARM 352
+A G+ +G+ KD VL A RA + + A + KK+ I +I + +G AD
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 353 LSRYMRTEC-LNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQGP 529
++ + + L+ Y++ P R+++++ Q RY +G L++ GYD +GP
Sbjct: 90 VTSMISSNIELHSLYTNRKP----RVVTALTMLKQHLF-RYQGH-IGAYLVLGGYDCKGP 143
Query: 530 HIY 538
H++
Sbjct: 144 HLF 146
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.53
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = +2
Query: 197 GSATIGLKNKDYAVLIALKRA-VSELSAYQ--KKIIPIDEHIGISISGLTADARMLSRYM 367
G+ T+ + + V+ RA L A Q KK+I I+ ++ +++G AD + +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 368 RTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRYDKRPLGVGLLVAGYDDQGPHIY 538
EC H+ + + V S+ + T Y L +G ++AG G +Y
Sbjct: 121 GMECRLHQLRNKELISV----SAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALY 173
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 293 IPIDEHIGISISGLTADARMLSRYMRTE 376
+PID G I LT D+ ++ Y +TE
Sbjct: 231 VPIDPKFGEMIENLTPDSNIVHLYSKTE 258
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 202 CNHWSEE*GLCGVDSVETRCERIVRISEENY 294
C E+ LCG +S+ RC I +++ E +
Sbjct: 306 CTATVEKFCLCGKESIHARCSNISKVNTEPF 336
>SPBC15C4.02 |||ABC1 kinase family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 594
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 289 NYSY**TYWNFYIRSYCRCSYAESLHAHRVSQ-SPIFS*C 405
NYS YW+F++RS+ + +H H + + ++S C
Sbjct: 14 NYSKRKNYWHFWLRSFMSNNRKFLVHIHLIPHLNSLYSIC 53
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 254 VSTLSTPHSPYSSDQWLQNQVSQLPL 177
++T P S Y S +W + QLPL
Sbjct: 236 IATSEQPISAYHSGEWFEKPSEQLPL 261
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 38 YINFMKLIHSRNCTF----LN*IKRKMFRNQYDSDVTVWSPQGRLHQVEYA 178
Y+ ++K + ++N + +N I +K+ + +YDS V+VW+ +L + A
Sbjct: 594 YLIYLKQMETKNLSEEKPQVNKIVKKILK-KYDSSVSVWNTYAQLEHLSGA 643
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 248 TLSTPHSPYSSDQWLQNQVSQLPLH 174
T ++P++ S QW+++ V Q P+H
Sbjct: 253 TTTSPNAIIRSVQWIRSFVPQAPIH 277
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,580,342
Number of Sequences: 5004
Number of extensions: 53088
Number of successful extensions: 152
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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