Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_O14
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 198 3e-51
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 116 1e-26
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 111 4e-25
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical p... 28 4.5
Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical pr... 28 4.5
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 27 7.9
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 198 bits (482), Expect = 3e-51
Identities = 88/151 (58%), Positives = 120/151 (79%)
Frame = +2
Query: 104 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ 283
MFRNQYD DVTVWSPQGRLHQVEYA+EA+K GSAT+G+K++ +AV++ALKRA ++LS++Q
Sbjct: 1 MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQ 60
Query: 284 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICT 463
KK+ ID H G+SI+GL +D R+L+RY++TEC + R+ + +P+ +L S+ K+Q T
Sbjct: 61 KKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANT 120
Query: 464 QRYDKRPLGVGLLVAGYDDQGPHIYQTCPSA 556
Q Y +RP GVG+L+AGYD G HI QT PSA
Sbjct: 121 QYYGRRPFGVGILIAGYDKDGAHIIQTDPSA 151
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 116 bits (280), Expect = 1e-26
Identities = 58/153 (37%), Positives = 94/153 (61%), Gaps = 3/153 (1%)
Frame = +2
Query: 113 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ--K 286
N+YD +T++SP G L QVEYA EAVK GS +G++ KD V+ K+++ L + +
Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIR 61
Query: 287 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 466
KI ID+H+ ++ +GL+ADAR+L R EC +++ + + P+ V + + N Q TQ
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 467 RYDKRPLGVGLLVAGYDDQG-PHIYQTCPSANY 562
+RP G+ +L+ G+D G P +++T PS Y
Sbjct: 122 SPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAY 154
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 111 bits (267), Expect = 4e-25
Identities = 58/153 (37%), Positives = 95/153 (62%), Gaps = 4/153 (2%)
Frame = +2
Query: 116 QYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL---SAYQK 286
+YDS T++SP+GRL+QVEYAMEA+ +G+ + + V+ A ++ V +L S +
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTE 63
Query: 287 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 466
K+ + ++I +++G+TADA +L ++R ++R S+ MPV +L+ ++ N+ Q TQ
Sbjct: 64 KVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRYTQ 123
Query: 467 RYDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANY 562
KRP GV LL G+D G +YQ+ PS NY
Sbjct: 124 IGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNY 156
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 108 bits (259), Expect = 3e-24
Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 6/158 (3%)
Frame = +2
Query: 110 RNQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQ-- 283
R++YD V +SP+GRL QVEYA+EAVKLGS +IG+K + +L A KR+ S+L
Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI 64
Query: 284 KKIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGN-KMQI- 457
+KI +D+HIG++ +GL AD+R L + E N ++++ + V + SV N +Q
Sbjct: 65 EKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFG 124
Query: 458 --CTQRYDKRPLGVGLLVAGYDDQGPHIYQTCPSANYL 565
+ RP GV +L AG D +G ++ PS ++
Sbjct: 125 DDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFI 162
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 95.9 bits (228), Expect = 2e-20
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Frame = +2
Query: 113 NQYDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSELSAYQKKI 292
+ Y +T +SP G+L Q+EYA+ AVK G ++GL+ KD V++A + S L+ Q K+
Sbjct: 3 DHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKD-GVVLATENVGSVLTDDQPKV 61
Query: 293 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 472
I +HIG SG+ D R+L + R + + + MP +L++ + MQ TQ
Sbjct: 62 EQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSG 121
Query: 473 DKRPLGVGLLVAGYDDQ--GPHIYQTCPSANY 562
RP G LL+AG+D P ++Q PS Y
Sbjct: 122 GVRPFGASLLIAGWDKNPGRPLLFQCDPSGAY 153
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 82.6 bits (195), Expect = 2e-16
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Frame = +2
Query: 119 YDSDVTVWSPQGRLHQVEYAMEAVKLGSAT-IGLKNKDYAVLIALKRAVSELSAYQ--KK 289
+D +T++SP+GR++QVEYA +A+ + T + +K D AV+ KR L
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 290 IIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQR 469
+ I + +G G+ DA+ + + E + +Y + MP L + + Q TQ
Sbjct: 69 VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQN 128
Query: 470 YDKRPLGVGLLVAGYDDQ-GPHIYQTCPSANY 562
+ R LG LL YDD+ GP +Y+ P+ Y
Sbjct: 129 AEMRSLGCALLFISYDDEKGPEVYRVDPAGYY 160
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 67.7 bits (158), Expect = 6e-12
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Frame = +2
Query: 119 YDSDVTVWSPQGRLHQVEYAMEAVKLGSATIGLKNKDYAVLIALKRAVSEL--SAYQKKI 292
YD + +SP GR+ QVEYA +AV I ++ K+ V++A K S+L ++
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRM 67
Query: 293 IPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQRY 472
+++++G++++G D L Y E + + PMP+ + +SV + I T
Sbjct: 68 FNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGI 127
Query: 473 DKRPLGVGLLVAGYDDQ-GPHIYQTCPSA-NY 562
RP G G ++ Q G ++ PS NY
Sbjct: 128 -SRPFGAGAFFMSWNKQTGGRLFLVEPSGLNY 158
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 35.9 bits (79), Expect = 0.022
Identities = 22/85 (25%), Positives = 39/85 (45%)
Frame = +2
Query: 287 KIIPIDEHIGISISGLTADARMLSRYMRTECLNHRYSHDAPMPVGRLISSVGNKMQICTQ 466
KI+ I + + +++G AD + +R + C + + V N +
Sbjct: 104 KILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREKTSITVSAASKYFANTLY---- 159
Query: 467 RYDKRPLGVGLLVAGYDDQGPHIYQ 541
Y + L VG +VAGYD +GP I++
Sbjct: 160 GYRGQGLSVGSMVAGYDKKGPQIFK 184
>Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 363 TCAQSVSITDILMMLQCPLDVSS---RQLVTKCRFVPRDTTSDPWVWACWLL 509
T + ++ D+++ ++ ++S RQ V F DTT+ WACW L
Sbjct: 275 TSKRMMNFLDLMLSMEESNQLTSEDIRQEVDTFMFAGHDTTTSSTSWACWNL 326
>Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 363 TCAQSVSITDILMMLQCPLDVSS---RQLVTKCRFVPRDTTSDPWVWACWLL 509
T + ++ D+++ ++ ++S RQ V F DTT+ WACW L
Sbjct: 275 TSKRMMNFLDLMLSMEESNQLTSEDIRQEVDTFMFAGHDTTTSSTSWACWNL 326
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 248 TLSTPHSPYSSDQWLQNQVSQLPLHTPLDGDGLED 144
T+++ H+ + Q +QN++S +P H P G E+
Sbjct: 345 TITSVHAKSHNVQIVQNKISSVPSHLPTSNGGKEN 379
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 248 TLSTPHSPYSSDQWLQNQVSQLPLHTPLD 162
TL P +P D LQN + Q+PL T L+
Sbjct: 422 TLDLPSAPLYRDVQLQNIIPQVPLSTLLE 450
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,378,367
Number of Sequences: 27780
Number of extensions: 307956
Number of successful extensions: 813
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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