Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_O09
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical...    28   5.0  
AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical ...    28   5.0  
U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine rece...    28   6.6  

>AL032623-18|CAN99758.1|  330|Caenorhabditis elegans Hypothetical
           protein Y43F8B.15 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 5   GNMIKFKSTKWSFTFNRTNYFF 70
           GNMIKF    W+  F+ TN F+
Sbjct: 217 GNMIKFSINLWNAVFSFTNSFY 238


>AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical
           protein F48A11.4 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 450 RNWLFXGKYTIIYIYSRNSIFF 385
           +NWL  G Y I ++Y  N  FF
Sbjct: 361 QNWLIFGSYLIYFLYFGNLFFF 382


>U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein47 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -1

Query: 441 LFXGKYTIIYIYSRNSIFFISLEGLYMSQIQYY*NLNIHIF 319
           L+  ++TI  +++ N   F S+  LY S  +Y+ +  +H+F
Sbjct: 114 LYSQRFTIGMLFTANMYAFASIIVLYTSGCRYFWSSELHMF 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,638,172
Number of Sequences: 27780
Number of extensions: 143323
Number of successful extensions: 187
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)