Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_O04
(397 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p pro... 141 3e-34
AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB... 141 3e-34
AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA... 141 3e-34
U03289-1|AAA03464.1| 113|Drosophila melanogaster protein ( Dros... 139 1e-33
AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p pro... 28 3.9
AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-P... 28 3.9
BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p pro... 27 6.8
AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p pro... 27 6.8
AY070582-1|AAL48053.1| 446|Drosophila melanogaster RE68603p pro... 27 6.8
AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p pro... 27 6.8
AL023874-2|CAA19642.1| 446|Drosophila melanogaster EG:100G10.6 ... 27 6.8
AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicas... 27 6.8
AE014298-444|AAF45807.1| 446|Drosophila melanogaster CG2662-PA ... 27 6.8
AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA... 27 6.8
AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB... 27 6.8
AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA... 27 6.8
AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase... 27 6.8
AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase... 27 6.8
>AY071076-1|AAL48698.1| 117|Drosophila melanogaster RE14595p
protein.
Length = 117
Score = 141 bits (342), Expect = 3e-34
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +1
Query: 136 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 315
LNNQVLFDK TYEKLYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQH
Sbjct: 43 LNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
Query: 316 HGQVIYTRATKGDD 357
H QVIYTRATKGD+
Sbjct: 103 HSQVIYTRATKGDE 116
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 15 PKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
PKKDAK+SAKQPQKTQKKKEGS ++++++
Sbjct: 3 PKKDAKSSAKQPQKTQKKKEGSGGGKAKKKK 33
>AE014297-1258|AAF54605.2| 117|Drosophila melanogaster CG6684-PB,
isoform B protein.
Length = 117
Score = 141 bits (342), Expect = 3e-34
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +1
Query: 136 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 315
LNNQVLFDK TYEKLYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQH
Sbjct: 43 LNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
Query: 316 HGQVIYTRATKGDD 357
H QVIYTRATKGD+
Sbjct: 103 HSQVIYTRATKGDE 116
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 15 PKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
PKKDAK+SAKQPQKTQKKKEGS ++++++
Sbjct: 3 PKKDAKSSAKQPQKTQKKKEGSGGGKAKKKK 33
>AE014297-1257|AAN13495.1| 117|Drosophila melanogaster CG6684-PA,
isoform A protein.
Length = 117
Score = 141 bits (342), Expect = 3e-34
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +1
Query: 136 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 315
LNNQVLFDK TYEKLYKEVP YKLITP+VVSERLK+RGSLA+RALIELREKGLIKQVVQH
Sbjct: 43 LNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQH 102
Query: 316 HGQVIYTRATKGDD 357
H QVIYTRATKGD+
Sbjct: 103 HSQVIYTRATKGDE 116
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +3
Query: 15 PKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
PKKDAK+SAKQPQKTQKKKEGS ++++++
Sbjct: 3 PKKDAKSSAKQPQKTQKKKEGSGGGKAKKKK 33
>U03289-1|AAA03464.1| 113|Drosophila melanogaster protein (
Drosophila melanogasterSevelin ribosomal protein homolog
gene, partial cds. ).
Length = 113
Score = 139 bits (336), Expect = 1e-33
Identities = 66/74 (89%), Positives = 70/74 (94%)
Frame = +1
Query: 136 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 315
LNNQVLFDK TYEKLYKEVP YKLITP+VVSERLK+RGSL +RALIELREKGLIKQVVQH
Sbjct: 39 LNNQVLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLDKRALIELREKGLIKQVVQH 98
Query: 316 HGQVIYTRATKGDD 357
H QVIYTRATKGD+
Sbjct: 99 HSQVIYTRATKGDE 112
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +3
Query: 21 KDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
KDAK+SAKQPQKTQKKKEGS ++++++
Sbjct: 1 KDAKSSAKQPQKTQKKKEGSGGGKAKKKK 29
>AY061596-1|AAL29144.1| 751|Drosophila melanogaster SD04745p
protein.
Length = 751
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 18 KKDAKASAKQPQKTQ-KKKEGSXWRQSQEEEVVQRKSS*QVEQ 143
KK KA+ ++ +KT+ KKK+ ++ ++E+ QRKS + E+
Sbjct: 400 KKSKKATKEKSKKTKNKKKKKKAEKEQEKEKEKQRKSKKEKEK 442
>AE014134-2932|AAF53667.3| 1330|Drosophila melanogaster CG12750-PA
protein.
Length = 1330
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 18 KKDAKASAKQPQKTQ-KKKEGSXWRQSQEEEVVQRKSS*QVEQ 143
KK KA+ ++ +KT+ KKK+ ++ ++E+ QRKS + E+
Sbjct: 991 KKSKKATKEKSKKTKNKKKKKKAEKEQEKEKEKQRKSKKEKEK 1033
>BT021362-1|AAX33510.1| 1313|Drosophila melanogaster LP14331p
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 275 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 156
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>AY071361-1|AAL48983.1| 521|Drosophila melanogaster RE39556p
protein.
Length = 521
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 314 CWTTCLMRPFSLSSMSALLAR 252
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AY070582-1|AAL48053.1| 446|Drosophila melanogaster RE68603p
protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 18 KKDAKASAKQPQKTQKKKEGSXWRQSQEEEVVQRKSS*QVEQP 146
K + A +QP KT+KKKE +++ ++EE Q K + +P
Sbjct: 294 KIEKLAKRRQPLKTEKKKE---YKKEEDEEPAQIKVKVEKVEP 333
>AY058252-1|AAL13481.1| 561|Drosophila melanogaster GH01404p
protein.
Length = 561
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 3 QRCXPKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
+RC KKD K + ++T++ + + + QEE+
Sbjct: 411 ERCLDKKDVKEKKLESRETKRSLQNNELQHKQEED 445
>AL023874-2|CAA19642.1| 446|Drosophila melanogaster EG:100G10.6
protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 18 KKDAKASAKQPQKTQKKKEGSXWRQSQEEEVVQRKSS*QVEQP 146
K + A +QP KT+KKKE +++ ++EE Q K + +P
Sbjct: 294 KIEKLAKRRQPLKTEKKKE---YKKEEDEEPAQIKVKVEKVEP 333
>AF134239-1|AAD43051.1| 1057|Drosophila melanogaster Recq helicase 5
protein.
Length = 1057
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 3 QRCXPKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
+RC KKD K + ++T++ + + + QEE+
Sbjct: 908 ERCLDKKDVKEKKLESRETKRSLQNNELQHKQEED 942
>AE014298-444|AAF45807.1| 446|Drosophila melanogaster CG2662-PA
protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 18 KKDAKASAKQPQKTQKKKEGSXWRQSQEEEVVQRKSS*QVEQP 146
K + A +QP KT+KKKE +++ ++EE Q K + +P
Sbjct: 294 KIEKLAKRRQPLKTEKKKE---YKKEEDEEPAQIKVKVEKVEP 333
>AE014297-1601|AAF54879.2| 521|Drosophila melanogaster CG7091-PA
protein.
Length = 521
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 314 CWTTCLMRPFSLSSMSALLAR 252
CW CL+ +++SSMS L R
Sbjct: 2 CWRLCLLHRYAMSSMSWTLPR 22
>AE014296-2400|AAN11801.1| 1058|Drosophila melanogaster CG4879-PB,
isoform B protein.
Length = 1058
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 3 QRCXPKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
+RC KKD K + ++T++ + + + QEE+
Sbjct: 908 ERCLDKKDVKEKKLESRETKRSLQNNELQHKQEED 942
>AE013599-1857|AAF58271.3| 1313|Drosophila melanogaster CG8523-PA
protein.
Length = 1313
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 275 SMSALLAREPRTFNLSDTTAGVISLYCG-TSLYSFSYVGLS 156
++S LL + R F+L +T G+I L C S+ F+Y S
Sbjct: 134 AISTLLLDKVRQFSLQNTYIGIIMLVCSYLSITCFNYAAHS 174
>AB031087-1|BAA88313.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 3 QRCXPKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
+RC KKD K + ++T++ + + + QEE+
Sbjct: 908 ERCLDKKDVKEKKLESRETKRSLQNNELQHKQEED 942
>AB031086-1|BAA88312.1| 1058|Drosophila melanogaster DNA helicase
RECQE protein.
Length = 1058
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 3 QRCXPKKDAKASAKQPQKTQKKKEGSXWRQSQEEE 107
+RC KKD K + ++T++ + + + QEE+
Sbjct: 908 ERCLDKKDVKEKKLESRETKRSLQNNELQHKQEED 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,599,507
Number of Sequences: 53049
Number of extensions: 353432
Number of successful extensions: 1119
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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