Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_N10
         (454 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical pr...    30   0.91 
AL110485-23|CAB60377.3|  770|Caenorhabditis elegans Hypothetical...    27   8.4  

>L15313-8|AAA28196.1|  469|Caenorhabditis elegans Hypothetical
           protein ZK353.8 protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 0.91
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = +3

Query: 234 WALNP-TAYQNVDCSEVDWGGIGSAMDSNERSCXHXGTGATSNQTXCKR 377
           W L P TA+ N+ C  + W   G   DS  +      T   S     +R
Sbjct: 382 WVLYPLTAFWNIFCGMIGWNSTGKQQDSKSKKNDGPSTSGQSGSQPQRR 430


>AL110485-23|CAB60377.3|  770|Caenorhabditis elegans Hypothetical
           protein Y46G5A.29 protein.
          Length = 770

 Score = 26.6 bits (56), Expect = 8.4
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 336 YXSSFFHCYPXLSQCRPSRLHCSPH-FDRPLD 244
           Y +S FHCY   S   P  LH  P   D P D
Sbjct: 30  YETSGFHCYSRDSMRLPRHLHGRPQTTDPPFD 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,971,322
Number of Sequences: 27780
Number of extensions: 196472
Number of successful extensions: 417
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 371
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)