Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_N10
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   1.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.3  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 159 LLNHIIIQPKMYSNKDAANPGYPTQWALNPTAYQNVDC 272
           +LN  ++    Y  +    PG+P +   NP    + DC
Sbjct: 89  VLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDC 126


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 159 LLNHIIIQPKMYSNKDAANPGYPTQWALNPTAYQNVDC 272
           +LN  ++    Y  +    PG+P +   NP    + DC
Sbjct: 89  VLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDC 126


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 278 FTAVHILIGRWIQGPLGGISWI 213
           F  V+ L+G W+ GP    +WI
Sbjct: 81  FAGVNDLLGYWVFGPRFCDTWI 102


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 278 FTAVHILIGRWIQG 237
           F   ++L+G+WI G
Sbjct: 92  FNVAYLLLGKWIFG 105


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 278 FTAVHILIGRWIQG 237
           F   ++L+G+WI G
Sbjct: 92  FNVAYLLLGKWIFG 105


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 278 FTAVHILIGRWIQG 237
           F   ++L+G+WI G
Sbjct: 92  FNVAYLLLGKWIFG 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,551
Number of Sequences: 438
Number of extensions: 2475
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)