Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_N08
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075328-1|AAL68195.2| 372|Drosophila melanogaster GH10876p pro... 34 0.14
AE014297-2430|AAF55486.1| 366|Drosophila melanogaster CG7780-PA... 34 0.14
M19059-1|AAC12788.1| 1394|Drosophila melanogaster position-speci... 31 1.3
AE014298-2474|AAF48661.1| 1396|Drosophila melanogaster CG9623-PB... 31 1.3
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 29 5.3
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 29 5.3
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 29 5.3
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 29 7.0
AE014298-1756|AAF48150.1| 314|Drosophila melanogaster CG12720-P... 29 7.0
Z70316-1|CAA94391.2| 662|Drosophila melanogaster tyramine-beta-... 28 9.2
BT025901-1|ABG02145.1| 573|Drosophila melanogaster IP03613p pro... 28 9.2
BT015298-1|AAT94527.1| 270|Drosophila melanogaster AT23701p pro... 28 9.2
AE014298-1104|AAO41640.1| 670|Drosophila melanogaster CG1543-PB... 28 9.2
AE014297-242|AAF52035.2| 270|Drosophila melanogaster CG14668-PA... 28 9.2
>AY075328-1|AAL68195.2| 372|Drosophila melanogaster GH10876p
protein.
Length = 372
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 203 YFCAHDAVIHQSCKDELSSDTPXMYLYKARRKYSHN 310
+F ++A SCKDE +D +LYK + Y HN
Sbjct: 19 FFYQNEAKSKVSCKDEAGNDVDWWHLYKLPKHYQHN 54
>AE014297-2430|AAF55486.1| 366|Drosophila melanogaster CG7780-PA
protein.
Length = 366
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 203 YFCAHDAVIHQSCKDELSSDTPXMYLYKARRKYSHN 310
+F ++A SCKDE +D +LYK + Y HN
Sbjct: 13 FFYQNEAKSKVSCKDEAGNDVDWWHLYKLPKHYQHN 48
>M19059-1|AAC12788.1| 1394|Drosophila melanogaster position-specific
antigen 2 alpha-subunit precursor protein.
Length = 1394
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 529 PARTHKWSYHQQKSSLVSFASAMDRLVAPT-LWPHNTFYHQKKTSSVP 389
P RT+ W YH+Q S F++A++ + + ++Y Q +T S+P
Sbjct: 184 PCRTNNWGYHRQGSCQAGFSAAINGNGSRLFIGAPGSWYWQGQTYSIP 231
>AE014298-2474|AAF48661.1| 1396|Drosophila melanogaster CG9623-PB,
isoform B protein.
Length = 1396
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 529 PARTHKWSYHQQKSSLVSFASAMDRLVAPT-LWPHNTFYHQKKTSSVP 389
P RT+ W YH+Q S F++A++ + + ++Y Q +T S+P
Sbjct: 184 PCRTNNWGYHRQGSCQAGFSAAINGNGSRLFIGAPGSWYWQGQTYSIP 231
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 585 SNRNASLLHGRNR-QGGGTYPRGLTSGPTTSKKVLLS 478
S RN S+ NR + PR TS PTTSKKVL S
Sbjct: 847 SQRNISINKRLNRIRAFDKKPRKETSPPTTSKKVLAS 883
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 585 SNRNASLLHGRNR-QGGGTYPRGLTSGPTTSKKVLLS 478
S RN S+ NR + PR TS PTTSKKVL S
Sbjct: 134 SQRNISINKRLNRIRAFDKKPRKETSPPTTSKKVLAS 170
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 585 SNRNASLLHGRNR-QGGGTYPRGLTSGPTTSKKVLLS 478
S RN S+ NR + PR TS PTTSKKVL S
Sbjct: 847 SQRNISINKRLNRIRAFDKKPRKETSPPTTSKKVLAS 883
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 585 SNRNASLLHGRNR-QGGGTYPRGLTSGPTTSKKVLLS 478
S RN S+ NR + PR TS PTTSKKVL S
Sbjct: 924 SQRNLSINKRLNRIRTLDRKPRNETSPPTTSKKVLAS 960
>AE014298-1756|AAF48150.1| 314|Drosophila melanogaster CG12720-PA
protein.
Length = 314
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 612 SIVTTAAYPSNRNASLLHGRNRQGGGTYPRGLTSGPTTSKKVLLSASRQLWTD 454
S V+ Y SN N L + GG + G+T+ S L+ S + +D
Sbjct: 61 STVSAGKYQSNANLGLFPNSSSSGGSSVQNGVTAHTPRSTNPFLNGSTKFASD 113
>Z70316-1|CAA94391.2| 662|Drosophila melanogaster
tyramine-beta-hydroxylase protein.
Length = 662
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 578 ETHHCFTAEIDRAVVPTRADSQVVLPPAKKFSCQLRVSYGQTGGTYTVAPQYVLP 414
E HC E + +P LPP K ++ V + GT+T P+ LP
Sbjct: 307 EVFHCEAGEHEE--IPLYNGDCEQLPPRAKICSKVMVLWAMGAGTFTYPPEAGLP 359
>BT025901-1|ABG02145.1| 573|Drosophila melanogaster IP03613p
protein.
Length = 573
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 578 ETHHCFTAEIDRAVVPTRADSQVVLPPAKKFSCQLRVSYGQTGGTYTVAPQYVLP 414
E HC E + +P LPP K ++ V + GT+T P+ LP
Sbjct: 218 EVFHCEAGEHEE--IPLYNGDCEQLPPRAKICSKVMVLWAMGAGTFTYPPEAGLP 270
>BT015298-1|AAT94527.1| 270|Drosophila melanogaster AT23701p
protein.
Length = 270
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 585 SNRNASLLHGRNRQGGGTYPRGLTSGPTTSKKVLL 481
S +N + R RQ GG+ P+G +G K++ L
Sbjct: 184 SRKNEHDIRRRQRQSGGSLPKGSIAGAIVGKRLRL 218
>AE014298-1104|AAO41640.1| 670|Drosophila melanogaster CG1543-PB
protein.
Length = 670
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -1
Query: 578 ETHHCFTAEIDRAVVPTRADSQVVLPPAKKFSCQLRVSYGQTGGTYTVAPQYVLP 414
E HC E + +P LPP K ++ V + GT+T P+ LP
Sbjct: 315 EVFHCEAGEHEE--IPLYNGDCEQLPPRAKICSKVMVLWAMGAGTFTYPPEAGLP 367
>AE014297-242|AAF52035.2| 270|Drosophila melanogaster CG14668-PA
protein.
Length = 270
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 585 SNRNASLLHGRNRQGGGTYPRGLTSGPTTSKKVLL 481
S +N + R RQ GG+ P+G +G K++ L
Sbjct: 184 SRKNEHDIRRRQRQSGGSLPKGSIAGAIVGKRLRL 218
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,585,090
Number of Sequences: 53049
Number of extensions: 536126
Number of successful extensions: 1329
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -