Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_N08
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78546-5|CAO79773.1|  962|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z78412-9|CAD21655.1|  454|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical p...    27   8.5  
Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical p...    27   8.5  

>Z78546-5|CAO79773.1|  962|Caenorhabditis elegans Hypothetical
           protein T21H8.1b protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/66 (31%), Positives = 35/66 (53%)
 Frame = -1

Query: 572 HHCFTAEIDRAVVPTRADSQVVLPPAKKFSCQLRVSYGQTGGTYTVAPQYVLPPKKNFIS 393
           H+  +A + R V   +A S + LP +KK S     S G+ GG+ +   Q    PK+N+ +
Sbjct: 493 HNYSSASLPRGV--GKASSTLTLP-SKKLSVASGTSVGELGGSMSSVAQPT--PKRNYRA 547

Query: 392 TLNDFI 375
            +N +I
Sbjct: 548 QMNRWI 553


>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical
           protein F18C5.3 protein.
          Length = 1490

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 589 PFKPKRITASRQK*TGRWYLPARTHKWSYHQQKSSLVSFASAMDRLVAPTLWP 431
           PF   ++ AS  +    + +   T  W   +QK  L+    A+D L+AP LWP
Sbjct: 66  PFAIVKLLASICRIPSFYQMLTVTINWRIKEQKDVLLK-CDALDLLLAPLLWP 117


>Z82287-1|CAB05316.1|  366|Caenorhabditis elegans Hypothetical
           protein ZK550.1 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 528 PRGLTSGPTTSKKVLLSASRQLWTDWW 448
           P  LT  PT S+  LLS +  +WTD W
Sbjct: 251 PIPLTKYPTISEYNLLSTNCNVWTDAW 277


>Z78412-9|CAD21655.1|  454|Caenorhabditis elegans Hypothetical
           protein M176.10 protein.
          Length = 454

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -1

Query: 500 PAKKFSCQLRVSYGQTGGTYTVAPQYVLPPKKNFISTL 387
           P       + V  G T  T   +    +PPKK F STL
Sbjct: 381 PVNPIHADIEVIVGNTNATTITSTVAPIPPKKGFFSTL 418


>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
           protein K03H1.5 protein.
          Length = 1385

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -1

Query: 443 YTVAPQYVLPPKKNFISTLNDFILQVNKIKITNIFSRRLCLKNADYVSIFFWLCKGTXQG 264
           Y  AP Y LPP   FI TL+++ L +N          R C K AD+   ++W  +    G
Sbjct: 799 YGAAP-YRLPP---FIPTLSNYQLDLNPY--------RTCCKYADHCEFYYW--RRMTNG 844

Query: 263 CR 258
           C+
Sbjct: 845 CQ 846


>Z83122-11|CAB05603.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 374 LQVNKIKITNIFSRRLCLKNADYVS 300
           +Q   I + NI ++ +C++NAD VS
Sbjct: 186 IQTRVIGVKNIIAKHICIENADEVS 210


>Z81073-10|CAB03035.2|  648|Caenorhabditis elegans Hypothetical
           protein F30F8.8 protein.
          Length = 648

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 374 LQVNKIKITNIFSRRLCLKNADYVS 300
           +Q   I + NI ++ +C++NAD VS
Sbjct: 186 IQTRVIGVKNIIAKHICIENADEVS 210


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,625,187
Number of Sequences: 27780
Number of extensions: 272335
Number of successful extensions: 741
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)