Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_N07
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119262-1|AAM51122.1|  161|Drosophila melanogaster SD23244p pro...    85   6e-17
AE014297-4499|AAF56984.1|  161|Drosophila melanogaster CG15525-P...    84   9e-17
AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA ...    29   4.5  

>AY119262-1|AAM51122.1|  161|Drosophila melanogaster SD23244p
           protein.
          Length = 161

 Score = 84.6 bits (200), Expect = 6e-17
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +2

Query: 272 LPKPKFRSYKPQDEALQESKLNDAEPTV-IEEEVKDLLEAGKEKVVLQDLDITSLAPRKP 448
           LPKP FRSYKPQ+E   + ++   EPT  IE  V+D L   ++ +V+ ++DIT+LAPRKP
Sbjct: 44  LPKPVFRSYKPQNETT-DGEILTQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPRKP 102

Query: 449 DWDLKRDVAKKLXRL 493
           DWDLKRD +KKL RL
Sbjct: 103 DWDLKRDASKKLERL 117


>AE014297-4499|AAF56984.1|  161|Drosophila melanogaster CG15525-PA
           protein.
          Length = 161

 Score = 84.2 bits (199), Expect = 9e-17
 Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = +2

Query: 272 LPKPKFRSYKPQDEALQESKLNDAEPTV-IEEEVKDLLEAGKEKVVLQDLDITSLAPRKP 448
           LPKP FRSYKPQ+E   + ++   EPT  IE  V+D L   ++ +V+ ++DIT+LAPRKP
Sbjct: 44  LPKPVFRSYKPQNETT-DGEILAQEPTGNIESAVEDQLSLLQQPMVIDEIDITNLAPRKP 102

Query: 449 DWDLKRDVAKKLXRL 493
           DWDLKRD +KKL RL
Sbjct: 103 DWDLKRDASKKLERL 117


>AE013599-322|AAF59277.1|  681|Drosophila melanogaster CG1850-PA
           protein.
          Length = 681

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 299 KPQDEALQESKLNDAEPTVIEEEVKDLLEAGKEKVVLQDLDITSLAPRK 445
           K  D  L+E+++ +AE   IE+E +  LE+ K++++       +  P K
Sbjct: 485 KEADRRLEETRILEAERLKIEQEDRQRLESEKQELLQLKATSAATVPEK 533


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,167,412
Number of Sequences: 53049
Number of extensions: 278913
Number of successful extensions: 1305
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)