Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_N01
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 165 2e-41
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 165 2e-41
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 54 1e-07
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 50 1e-06
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 34 0.097
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 34 0.097
07_03_0943 - 22778877-22780970,22781376-22781480,22781481-227820... 30 1.6
03_02_0947 + 12640438-12640824 29 3.6
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 6.3
05_01_0334 - 2642998-2643063,2643125-2643169,2643552-2643617,264... 27 8.4
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 165 bits (402), Expect = 2e-41
Identities = 80/129 (62%), Positives = 97/129 (75%)
Frame = +1
Query: 202 SSRK*KKEFRQ**RGLTN*QALKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIIN 381
S +K +KE ++ + + + +K G WDL +DKQ +Q EQPLQVARCTKII+
Sbjct: 37 SIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIIS 96
Query: 382 ADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTM 561
+++D KY+INVKQ AKFVV L D V+PTDIEEGMRVGVDRNKY I IPLPPKIDP+VTM
Sbjct: 97 PNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
Query: 562 MXVEEKPDV 588
M VEEKPDV
Sbjct: 157 MTVEEKPDV 165
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +3
Query: 144 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGLAPPA 299
LDE DIALLK+YG G Y+ IK+VE+ I+ + K++N+L GIKESDTGLAPP+
Sbjct: 18 LDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPS 69
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 165 bits (402), Expect = 2e-41
Identities = 80/129 (62%), Positives = 97/129 (75%)
Frame = +1
Query: 202 SSRK*KKEFRQ**RGLTN*QALKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIIN 381
S +K +KE ++ + + + +K G WDL +DKQ +Q EQPLQVARCTKII+
Sbjct: 37 SIKKVEKEIKEMAKKINDLCGIKESDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIIS 96
Query: 382 ADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTM 561
+++D KY+INVKQ AKFVV L D V+PTDIEEGMRVGVDRNKY I IPLPPKIDP+VTM
Sbjct: 97 PNTDDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
Query: 562 MXVEEKPDV 588
M VEEKPDV
Sbjct: 157 MTVEEKPDV 165
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = +3
Query: 144 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGLAPPA 299
LDE DIALLK+YG G Y+ IK+VE+ I+ + K++N+L GIKESDTGLAPP+
Sbjct: 18 LDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKESDTGLAPPS 69
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V K+VVD+ S+ T I RV + + Y +H+ LP K+DP V +M VE+
Sbjct: 101 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKV 160
Query: 580 PD 585
PD
Sbjct: 161 PD 162
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +1
Query: 406 IINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPD 585
I+ V K+VVD+ S+ T + RV + + Y +H+ LP K+DP V +M VE+ PD
Sbjct: 125 ILLVHPEGKYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPD 184
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 33.9 bits (74), Expect = 0.097
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 457 VAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
V P ++ G VGV+++ Y I LP + D V M V+EKP
Sbjct: 116 VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 157
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 33.9 bits (74), Expect = 0.097
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 457 VAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
V P ++ G VGV+++ Y I LP + D V M V+EKP
Sbjct: 119 VDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKP 160
>07_03_0943 -
22778877-22780970,22781376-22781480,22781481-22782059,
22782149-22782187,22782340-22782372
Length = 949
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +1
Query: 304 WDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEG 483
W + T N + C K N D K ++ K K V+DL P+D E
Sbjct: 681 WGSIPNSSTTINFDMSNIHLCHKQYNVPPTDEKMVLKEKSQDKHVIDLNIPQVPSDYESA 740
Query: 484 M 486
+
Sbjct: 741 V 741
>03_02_0947 + 12640438-12640824
Length = 128
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 386 SALMIFVHRATCRGCSF--CSVCLSAARSXQGWRSQP 282
SAL +FVH A C + C+VCL R + R P
Sbjct: 26 SALPVFVHVAGCEAAAAVECAVCLGEVRDGERGRLLP 62
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 421 QFAKFVVDLQDSVAPTDIEEG 483
QFA F++D++D + P D+E G
Sbjct: 192 QFAIFLIDVRDGLQPLDLEVG 212
>05_01_0334 -
2642998-2643063,2643125-2643169,2643552-2643617,
2643625-2643730,2643770-2644349,2645780-2645871,
2645969-2646035,2646126-2646231,2646628-2646708,
2646789-2647058,2647158-2648788,2648834-2649385,
2650602-2651324,2651451-2651526
Length = 1486
Score = 27.5 bits (58), Expect = 8.4
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 286 WLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKF-VVDLQDSVA 462
W+ D AD+ ++ P R TKI + D K N K KF + L D +
Sbjct: 441 WVDSREDDGGADRGKSKSHFPRAKKRPTKIEPGEIGDCKKCKNTKLSGKFEALPLSDLML 500
Query: 463 PTDIEEGMRVGVDRNK 510
+D+ +G R +R K
Sbjct: 501 SSDV-KGKRASANRTK 515
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,451,565
Number of Sequences: 37544
Number of extensions: 237166
Number of successful extensions: 710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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