Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_N01
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of s... 191 1e-48
BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome, ma... 191 1e-48
AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein. 191 1e-48
AB075520-1|BAE45763.1| 433|Homo sapiens putative protein produc... 191 1e-48
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 52 2e-06
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 52 2e-06
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 52 2e-06
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 52 2e-06
AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase s... 52 2e-06
M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human immunodef... 30 7.0
CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein. 30 7.0
BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein. 30 7.0
BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome, ma... 30 7.0
BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome, ma... 30 7.0
BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome, ma... 30 7.0
AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase s... 30 7.0
>D11094-1|BAA01868.1| 433|Homo sapiens mammalian suppressor of sgv1
protein.
Length = 433
Score = 191 bits (466), Expect = 1e-48
Identities = 91/108 (84%), Positives = 93/108 (86%)
Frame = +1
Query: 265 LKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 444
+K G WDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVD
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVD 124
Query: 445 LQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
L D VAPTDIEEGMRVGVDRNKY IHIPLPPKIDPTVTMM VEEKPDV
Sbjct: 125 LSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDV 172
Score = 93.5 bits (222), Expect = 5e-19
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 69 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 248
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 249 NELTGIKESDTGLAPPAL 302
NELTGIKESDTGLAPPAL
Sbjct: 60 NELTGIKESDTGLAPPAL 77
>BC002589-1|AAH02589.1| 433|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 2 protein.
Length = 433
Score = 191 bits (466), Expect = 1e-48
Identities = 91/108 (84%), Positives = 93/108 (86%)
Frame = +1
Query: 265 LKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 444
+K G WDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVD
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVD 124
Query: 445 LQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
L D VAPTDIEEGMRVGVDRNKY IHIPLPPKIDPTVTMM VEEKPDV
Sbjct: 125 LSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDV 172
Score = 93.5 bits (222), Expect = 5e-19
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 69 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 248
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEDEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 249 NELTGIKESDTGLAPPAL 302
NELTGIKESDTGLAPPAL
Sbjct: 60 NELTGIKESDTGLAPPAL 77
>AC093701-1|AAS07429.1| 409|Homo sapiens unknown protein.
Length = 409
Score = 191 bits (466), Expect = 1e-48
Identities = 91/108 (84%), Positives = 93/108 (86%)
Frame = +1
Query: 265 LKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 444
+K G WDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVD
Sbjct: 41 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVD 100
Query: 445 LQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
L D VAPTDIEEGMRVGVDRNKY IHIPLPPKIDPTVTMM VEEKPDV
Sbjct: 101 LSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDV 148
Score = 87.0 bits (206), Expect = 4e-17
Identities = 39/53 (73%), Positives = 48/53 (90%)
Frame = +3
Query: 144 LDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRVNELTGIKESDTGLAPPAL 302
LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++NELTGIKESDTGLAPPAL
Sbjct: 1 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPAL 53
>AB075520-1|BAE45763.1| 433|Homo sapiens putative protein product
of Nbla10058 protein.
Length = 433
Score = 191 bits (466), Expect = 1e-48
Identities = 91/108 (84%), Positives = 93/108 (86%)
Frame = +1
Query: 265 LKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 444
+K G WDLAADKQTLQ+EQPLQVARCTKIINADS DPKYIINVKQFAKFVVD
Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVD 124
Query: 445 LQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
L D VAPTDIEEGMRVGVDRNKY IHIPLPPKIDPTVTMM VEEKPDV
Sbjct: 125 LSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDV 172
Score = 93.5 bits (222), Expect = 5e-19
Identities = 46/78 (58%), Positives = 57/78 (73%)
Frame = +3
Query: 69 MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 248
MPD+LG D R +LDEGDIALLK+YGQ Y++ IK+VE+ IQ ++K++
Sbjct: 1 MPDYLGADQRKTKEVEKDDKPIR-ALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKI 59
Query: 249 NELTGIKESDTGLAPPAL 302
NELTGIKESDTGLAPPAL
Sbjct: 60 NELTGIKESDTGLAPPAL 77
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 580 PD 585
PD
Sbjct: 144 PD 145
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 580 PD 585
PD
Sbjct: 144 PD 145
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 580 PD 585
PD
Sbjct: 144 PD 145
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 580 PD 585
PD
Sbjct: 144 PD 145
>AB209036-1|BAD92273.1| 345|Homo sapiens proteasome 26S ATPase
subunit 5 variant protein.
Length = 345
Score = 52.0 bits (119), Expect = 2e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V KFVVD+ ++ D+ RV + + Y +H LP K+DP V++M VE+
Sbjct: 80 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 139
Query: 580 PD 585
PD
Sbjct: 140 PD 141
>M34079-1|AAA36666.1| 404|Homo sapiens protein ( Human
immunodeficiency virus tat transactivator binding
protein-1 (tbp-1) mRNA, complete cds. ).
Length = 404
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 110 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 146
>CR456731-1|CAG33012.1| 404|Homo sapiens PSMC3 protein.
Length = 404
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 110 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 146
>BC107804-1|AAI07805.1| 491|Homo sapiens PSMC3 protein protein.
Length = 491
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 197 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 233
>BC106920-1|AAI06921.1| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 145 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 181
>BC073165-1|AAH73165.3| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 145 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 181
>BC008713-1|AAH08713.4| 439|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 3 protein.
Length = 439
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 145 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 181
>AK222485-1|BAD96205.1| 424|Homo sapiens proteasome 26S ATPase
subunit 3 variant protein.
Length = 424
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 130 LKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERP 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,708,885
Number of Sequences: 237096
Number of extensions: 1403134
Number of successful extensions: 9753
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9753
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -