Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_N01
(588 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 177 5e-45
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 51 5e-07
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 36 0.028
U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine rece... 29 3.2
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 28 5.7
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 28 5.7
AF022985-8|AAB69966.1| 354|Caenorhabditis elegans Hypothetical ... 28 5.7
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 7.5
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 7.5
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 7.5
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 7.5
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 7.5
AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 177 bits (431), Expect = 5e-45
Identities = 82/108 (75%), Positives = 90/108 (83%)
Frame = +1
Query: 265 LKSQTQGWLLQPXWDLAADKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 444
+K G WD+AADKQ +Q EQPLQVARCTKII +D +DP+Y+INVKQFAKFVVD
Sbjct: 67 VKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVD 126
Query: 445 LQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
L DSVAPTDIEEGMRVGVDRNKY IH+PLP KIDPTVTMM VEEKPDV
Sbjct: 127 LADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDV 174
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/79 (54%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +3
Query: 69 MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKR 245
MPDHLG+DMR +LDEGDIA+LK YGQG Y + +K ++ I+ +K+
Sbjct: 1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60
Query: 246 VNELTGIKESDTGLAPPAL 302
VNEL+G+KESDTGLAPPAL
Sbjct: 61 VNELSGVKESDTGLAPPAL 79
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ V K+VVD+ S+ + G RV + + Y +H LP K+DP V++M VE+
Sbjct: 94 KVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKV 153
Query: 580 PD 585
PD
Sbjct: 154 PD 155
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ K++VD+ SV + + G RV + + Y IH LP K+DP V++M VE+
Sbjct: 89 KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKV 148
Query: 580 PD 585
PD
Sbjct: 149 PD 150
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 400 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEK 579
K ++ K++VD+ SV + + G RV + + Y IH LP K+DP V++M VE+
Sbjct: 110 KVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKV 169
Query: 580 PD 585
PD
Sbjct: 170 PD 171
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 35.5 bits (78), Expect = 0.028
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +1
Query: 406 IINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKP 582
+I A + + + V P +++ G VGV+++ Y I LP + D V M V+E+P
Sbjct: 114 VIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERP 172
>U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein275 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 449 CKSTTNFANCFTLIIYFGSFESALMIFVHRATCRGC--SFCS 330
C+S N CF +I G F + +M+++H C FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = -2
Query: 560 MVTVGSIFGGSGMWXWYLLRSTPTLMPSSISVGATESCKSTTNFANCFTLIIYFGSFESA 381
++ + SI+GGS +W R + MP + E + T + +I ESA
Sbjct: 658 LLNIPSIYGGSNLWG--RSRKSKGRMPGLFPMKNAEKMQLQTRVQDIGDGLIELVGLESA 715
Query: 380 LMIFVHRATCRGCSFCSVC 324
+ + +A RG S C
Sbjct: 716 MQMGQIKAGVRGARRLSQC 734
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 472 IEEGMRVGVDRNKYXIHIPLPPKIDPTVTMMXVEEKPDV 588
++ G V + + + LPP+ D ++ M+ +EKPD+
Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDI 158
>AF022985-8|AAB69966.1| 354|Caenorhabditis elegans Hypothetical
protein T15B7.13 protein.
Length = 354
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 248 NPLHYCLNSFFYFLDDFCVLSLAV*LQKRNI 156
NPLH FF LD FC +S V L ++ +
Sbjct: 68 NPLHIYFLVFFTVLDFFCNISFIVVLSQKEL 98
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 299 HRNRNGSRRRRSDSDSD 315
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 299 HRNRNGSRRRRSDSDSD 315
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 194 HKNHQGSRRRNSDSNEE 244
H+N GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317
>AF067215-1|AAC17011.1| 495|Caenorhabditis elegans Hypothetical
protein ZK380.2 protein.
Length = 495
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 198 KIIKEVEEGIQTVMKRVNELTGIK 269
+IIK V+E ++ +MK+ E+ G+K
Sbjct: 113 QIIKNVDEAVKGLMKKDEEIAGLK 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,572,514
Number of Sequences: 27780
Number of extensions: 215850
Number of successful extensions: 680
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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