Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_M21
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0173 + 22956927-22958615 30 0.75
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 29 0.99
06_02_0198 - 12932526-12933032 29 1.7
08_02_0515 - 18047292-18047735 28 2.3
07_03_0127 + 13807328-13807846 28 2.3
12_02_0612 - 21134167-21134412 28 3.0
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 28 3.0
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 3.0
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 27 4.0
06_03_0319 + 19537529-19538056 27 4.0
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 27 5.3
09_04_0430 + 17502387-17503505 27 5.3
09_01_0183 - 2652173-2653924 27 5.3
06_01_0486 - 3455030-3455770 27 5.3
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 27 5.3
03_06_0468 + 34153425-34153823 27 5.3
11_01_0734 - 6078023-6078203,6078645-6078866,6079323-6079390,607... 27 7.0
07_03_1778 + 29451902-29452166,29452665-29452849,29453504-294536... 27 7.0
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 27 7.0
12_02_0039 + 12645790-12646224 26 9.2
11_04_0055 + 12935763-12936287 26 9.2
11_03_0198 - 11527711-11528163 26 9.2
09_02_0076 - 3959572-3960279 26 9.2
04_03_1022 - 21778315-21779007 26 9.2
04_01_0127 + 1368763-1369276,1385539-1385742,1386221-1386444,138... 26 9.2
03_05_0855 + 28267231-28267603,28267725-28267966,28268071-282681... 26 9.2
03_04_0233 + 19063780-19064404,19065480-19065601 26 9.2
01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959 26 9.2
>05_05_0173 + 22956927-22958615
Length = 562
Score = 29.9 bits (64), Expect = 0.75
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 382 PPKSCPLAGLAHEGVPGFSKINPPSTXHHPPLIKPPEPDFQA 257
PP S P A L P +P + HPP + PP P +A
Sbjct: 66 PPYSPPPAELVRPPTPLPEPYDPSAPEAHPPYVPPPVPPPEA 107
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 29.5 bits (63), Expect = 0.99
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 243 SGGYHAWKSGSGGFIKGGWCXVLGGFILLKPGTPSWANPAKGQDLGG 383
SGG W +G G GG GG + G W PA G D GG
Sbjct: 1548 SGG-GGWGTGGGSSWAGGGDGGSGGGDSNRGGGGGWGTPAGGSDGGG 1593
>06_02_0198 - 12932526-12933032
Length = 168
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +2
Query: 2 ELFAATRLTCARDLF*NTFANGRKLNLIQKY 94
E F AT L ARD F N+F RK LIQKY
Sbjct: 46 EEFEAT-LQQARDQFLNSFMQTRKGTLIQKY 75
>08_02_0515 - 18047292-18047735
Length = 147
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 2 ELFAATRLTCARDLF*NTFANGRKLNLIQKY 94
E F AT L ARD F N+F RK L+QKY
Sbjct: 46 EEFEAT-LQQARDQFLNSFMQTRKGTLVQKY 75
>07_03_0127 + 13807328-13807846
Length = 172
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 20 RLTCARDLF*NTFANGRKLNLIQKY 94
RL ARD F N+F RK L+QKY
Sbjct: 51 RLQQARDQFLNSFMQTRKGTLVQKY 75
>12_02_0612 - 21134167-21134412
Length = 81
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 8 FAATRLTCARDLF*NTFANGRKLNLIQKY*CTS 106
F AT L ARD F N+F RK L+QKY T+
Sbjct: 48 FEAT-LQQARDQFLNSFMQTRKGTLVQKYKITT 79
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 346 EGVPGFSKINPPSTXHHPPLIKPPEPDFQAW 254
+G P + PP +PP +PP P +Q +
Sbjct: 63 QGYPSSHGVYPPPQGPYPPPHQPPPPGYQGY 93
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +3
Query: 258 AWKSGSGGFIKGGWCXVLG-GFILLKPGT--PSWANPAKGQDLGG 383
AWKS G GGW G G P+W+NP G D G
Sbjct: 1292 AWKSKVGSENSGGWNQKSSWGKPSFSGGEQEPAWSNPKNGDDNSG 1336
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +1
Query: 79 FNSKILVHIYSVREVNYLQ*RQNEVYSIINDINYIAGVFGASVYNLQGW*D 231
F+ ++LV + +++ ++ E+Y I +N++A V G V+ L W D
Sbjct: 367 FDPRLLVSPPTFHTLDFTTMKEEELYEIDIPLNFVASV-GTRVHGLACWFD 416
>06_03_0319 + 19537529-19538056
Length = 175
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY*CTSIPSEK*IICSRGR 145
ARD F N+F RK L+QKY + + SRG+
Sbjct: 57 ARDQFLNSFMQTRKGTLVQKYKVKVVADDPRTSSSRGQ 94
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.1 bits (57), Expect = 5.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -3
Query: 373 SCPLAGLAHEGVPGFSKINPPSTXHHPPLIKPPEPDFQAW*PPEVHAY 230
S P L + P S PPS PP++ P P+ PPE+ Y
Sbjct: 403 SPPPPPLYYPPPPDISPSPPPSVTPLPPVVYPSPPEVTPS-PPEIAPY 449
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 337 PGFSKINPPSTXHHPPLIKPPEPDFQAW*PPEV 239
P F+ +PP PPL PP PD PP V
Sbjct: 397 PTFTYSSPPP----PPLYYPPPPDISPSPPPSV 425
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -3
Query: 382 PPKSCPLAGLAHEGVPGFSKINPPSTXHHPPL--IKPPEPDF 263
PP+S P P PP+T PP+ + PP P F
Sbjct: 189 PPQSTPPRAAPQSTPPQRVAPQPPATAAAPPIEPVAPPSPTF 230
>09_01_0183 - 2652173-2653924
Length = 583
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1
Query: 147 ILPLLQIIHFSDGIDVH 97
+LPLLQ +H + G+D+H
Sbjct: 375 LLPLLQALHTASGLDLH 391
>06_01_0486 - 3455030-3455770
Length = 246
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 382 PPKSCPLAGLAHEGVPGFSKINPPSTXHHPPLIKPPEPDF 263
PP + P VP + I PP+ + PP I PP P +
Sbjct: 86 PPPTPPYVPSPPPYVPPY--IPPPTPPYVPPYIPPPTPPY 123
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 27.1 bits (57), Expect = 5.3
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = -3
Query: 379 PKSCPLAG---LAHEGVPGFSKINPPSTXHHPPLIKPPEPDFQAW*PPEVHAY 230
P P AG ++ G G S PP PP I PP+P F + PP Y
Sbjct: 150 PAVPPCAGGCSISDGGACGASCKPPPPP---PPAIWPPQPSFYYYPPPPCGGY 199
>03_06_0468 + 34153425-34153823
Length = 132
Score = 27.1 bits (57), Expect = 5.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 379 PKSCPLAGLAHEGVPGFSKINPPSTXHHPPL 287
P CP+A A+ G G +I PP H PPL
Sbjct: 7 PSCCPVA--ANVGA-GAHRIPPPELLHRPPL 34
>11_01_0734 -
6078023-6078203,6078645-6078866,6079323-6079390,
6079919-6079981,6095129-6095782
Length = 395
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY*CTSIPSE 118
ARD F N+F RK L+QKY P +
Sbjct: 23 ARDQFLNSFMQTRKGTLVQKYKLKVFPDD 51
>07_03_1778 +
29451902-29452166,29452665-29452849,29453504-29453693,
29453990-29454168,29454263-29454314,29454426-29454553,
29454920-29455099,29455209-29455276,29455364-29455506,
29455682-29455743,29455874-29455987,29456180-29456320,
29456680-29456832,29456973-29457026,29457102-29457212,
29457339-29457512,29457600-29457680,29457788-29457886,
29457905-29458057
Length = 843
Score = 26.6 bits (56), Expect = 7.0
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = -3
Query: 385 VPPKSCPLAGLAHEGVPGFSKINPPSTXHHPPLIKPPEPDFQAW*PPEVHAYLTI 221
+PP PL H G G I+P ST PL++P P P V A+ TI
Sbjct: 76 IPPGLPPL----HTGREGKPIISPASTKRVGPLVRPTTPRSPV---PTVSAFETI 123
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 337 PGFSKINPPSTXHHPPLIKPPEPDFQAW*PPEVHAYLTIL 218
P K++PP PP PP+ + + PP Y T L
Sbjct: 190 PSVPKVSPPQPEKSPPNATPPKVERPSVAPPPKVDYATDL 229
>12_02_0039 + 12645790-12646224
Length = 144
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 5 ARDQFLNSFMQTRKGTLVQKY 25
>11_04_0055 + 12935763-12936287
Length = 174
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 57 ARDQFLNSFMQTRKGTLVQKY 77
>11_03_0198 - 11527711-11528163
Length = 150
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY*CTSIPSE 118
ARD F N+F RK +QKY +P +
Sbjct: 57 ARDQFLNSFMQTRKGTFVQKYKIKVVPDD 85
>09_02_0076 - 3959572-3960279
Length = 235
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 55 ARDQFLNSFMQTRKGTLVQKY 75
>04_03_1022 - 21778315-21779007
Length = 230
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -3
Query: 316 PPSTXHHPPLIKPPEPDFQAW--*PPEVH 236
PP + PP + PP P Q W PP H
Sbjct: 42 PPPPPYVPPHLLPPSPAPQQWYDHPPNYH 70
>04_01_0127 +
1368763-1369276,1385539-1385742,1386221-1386444,
1386520-1386707,1394955-1394970
Length = 381
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 57 ARDQFLNSFMQTRKGTLVQKY 77
>03_05_0855 +
28267231-28267603,28267725-28267966,28268071-28268193,
28268507-28268623,28268739-28268921,28269017-28269158,
28269379-28269544,28270194-28270212
Length = 454
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 134 SRGRMKYIALLTILIISQVYSAPQFITFKDGKIGVN 241
S + K++ALL+ ++ +S+ + FKD + VN
Sbjct: 272 STDKKKFLALLSFEVLVVAFSSVLWFLFKDSYVDVN 307
>03_04_0233 + 19063780-19064404,19065480-19065601
Length = 248
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 55 ARDQFLNSFMQTRKGTLVQKY 75
>01_06_0239 - 27791301-27791717,27793526-27793585,27793774-27793959
Length = 220
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 32 ARDLF*NTFANGRKLNLIQKY 94
ARD F N+F RK L+QKY
Sbjct: 128 ARDQFLNSFMQTRKGTLVQKY 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,693,430
Number of Sequences: 37544
Number of extensions: 284756
Number of successful extensions: 893
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -