Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_M21
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   3.8  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    20   8.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    20   8.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   8.7  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    20   8.7  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    20   8.7  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    20   8.7  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    20   8.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.7  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 317 PSQYXAPPTLNKTSRARLPGVVTARSSRLSYH 222
           P     PP+++ +S  R PG      ++L  H
Sbjct: 124 PESRDGPPSVSLSSPPREPGTPRINFTKLKRH 155



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 379 PKSCPLAGLAHEGVPGFSKINPPSTXHHPPLIKPPEPDFQ 260
           P S  L+    E  PG  +IN      H P  K P   F+
Sbjct: 130 PPSVSLSSPPRE--PGTPRINFTKLKRHHPRYKRPRTTFE 167


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
          determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
          determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
          determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
          determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
          determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
          determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
          determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 86 ELNSVYDRSRMYFKTSRVRKSVWLLQ 9
          E N +  RSR   +  + R+ VWL+Q
Sbjct: 21 EDNKIDLRSRTKEERLQHRREVWLIQ 46


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 375 NPAPWLDWPMRGF 337
           NP P + W + GF
Sbjct: 448 NPTPQVTWALDGF 460


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 375 NPAPWLDWPMRGF 337
           NP P + W + GF
Sbjct: 448 NPTPQVTWALDGF 460


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,228
Number of Sequences: 438
Number of extensions: 2890
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)