Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_M19
(588 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 3.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 6.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 6.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.0
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.0
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 9.0
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 241 KIATISEELCIGCGI 285
K+ TI + C+ CG+
Sbjct: 534 KVETIGDAYCVACGL 548
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 409 PXEVLXLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDW 525
P +L ++ G+ A++ L PNL + +DP W
Sbjct: 242 PYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLSDPEVW 280
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 6.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 409 PXEVLXLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDW 525
P +L ++ G+ A++ L PNL + +DP W
Sbjct: 295 PYALLTILLIRGLTLPGAMEGLKYYVTPNLSKLSDPEVW 333
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 231 SDFDAEFSHTYKQD 190
+ FD +F+ TYK+D
Sbjct: 1280 ASFDDKFTATYKED 1293
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 325 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 411
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +2
Query: 341 WRNTLPTVTPKTHSSSIACLSQDXE 415
WR++LPT + ++++ A L + E
Sbjct: 35 WRDSLPTKMRELNATACAALYERVE 59
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +1
Query: 442 GIGKSTALKILAGKQKPN 495
G+G S + ++ GKQ+P+
Sbjct: 1215 GVGVSNSGSVVLGKQQPS 1232
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 9.0
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 268 CIGCGICVKKCPF 306
C+GCG KC +
Sbjct: 36 CLGCGDSCHKCKY 48
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,062
Number of Sequences: 438
Number of extensions: 3384
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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