Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_M16
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.12
AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine re... 32 0.21
AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine r... 32 0.21
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 32 0.28
Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z83246-4|CAB05844.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73908-6|CAA98132.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.5
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 28 3.4
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 28 3.4
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 27 6.0
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 27 6.0
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 27 6.0
>Z81538-3|CAB04385.1| 168|Caenorhabditis elegans Hypothetical
protein F45H10.3 protein.
Length = 168
Score = 42.3 bits (95), Expect = 2e-04
Identities = 32/91 (35%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Frame = +1
Query: 142 HTNALRFEPLVSPR--TQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASS 315
+ N LRF S R + P +P G HK A NYY TRD RR V P +
Sbjct: 50 YQNPLRFPNTQSARPCSAELPALPGGVHHKLADNYYLTRDGRRNVDAPKVLYSSGEFVGG 109
Query: 316 DKGAPKQ-----AAN---VRPTPGHLYAWDK 384
+K P Q A N PTPG W +
Sbjct: 110 EKAQPAQVNQGVATNFGLTAPTPGFGAEWSR 140
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 166 PLVSPRTQP-PPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAA 342
P V P P PPE+ PS + A Y + R +V +D+T L + + P++
Sbjct: 374 PNVKPLVVPSPPELSQVPSFEEACEIYERWEDRDKVIEGVDLTTFLFNPQGSRKMPQKVR 433
Query: 343 NV 348
NV
Sbjct: 434 NV 435
>AF125952-5|AAD14697.2| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 61 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 86 YATFHLHCRLSGTSSLV-GSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLD 262
+A H C T+ +I P + ++W R+ +L+ S + S +T + E L
Sbjct: 179 FANSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLV 236
Query: 263 AKLHLQLMLPRNCLV 307
L+LQ++LP C V
Sbjct: 237 KGLNLQVLLPLICYV 251
>AC006722-11|AAW88389.1| 327|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 75 protein.
Length = 327
Score = 32.3 bits (70), Expect = 0.21
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 86 YATFHLHCRLSGTSSLV-GSIQMPFVLSHWFRLEPSLLQKSQTDPRTSMPTTTITQETLD 262
+A H C T+ +I P + ++W R+ +L+ S + S +T + E L
Sbjct: 179 FANSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSIST--ASSKSTRVMSELLV 236
Query: 263 AKLHLQLMLPRNCLV 307
L+LQ++LP C V
Sbjct: 237 KGLNLQVLLPLICYV 251
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.9 bits (69), Expect = 0.28
Identities = 18/65 (27%), Positives = 24/65 (36%)
Frame = +1
Query: 166 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAAN 345
P SP + P I K Y + R PP+ ++ SS PKQ
Sbjct: 420 PSPSPASNVPVTITLSAPAKSPATYGPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQTQP 479
Query: 346 VRPTP 360
+PTP
Sbjct: 480 AQPTP 484
>Z69646-8|CAA93477.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 110 RLSGTSSLVGSIQMPFVLSHWFRLEPSLLQKSQTDPR-TSMPTTT 241
RL S+ VGS +P+ ++ L +LLQ+ +P TS P T
Sbjct: 219 RLHAASTFVGSPSIPYATNYNGELASALLQQKNVEPNITSQPQAT 263
>Z50794-7|CAA90661.3| 896|Caenorhabditis elegans Hypothetical
protein F59F5.7 protein.
Length = 896
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 110 RLSGTSSLVGSIQMPFVLSHWFRLEPSLLQKSQTDPR-TSMPTTT 241
RL S+ VGS +P+ ++ L +LLQ+ +P TS P T
Sbjct: 219 RLHAASTFVGSPSIPYATNYNGELASALLQQKNVEPNITSQPQAT 263
>Z83246-4|CAB05844.1| 414|Caenorhabditis elegans Hypothetical
protein F53B2.6 protein.
Length = 414
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 178 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 339
P T PP P P++ H N R ARR P T++LLS+SS+ K P
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316
Query: 340 ANVRPT 357
RPT
Sbjct: 317 PETRPT 322
>Z73908-6|CAA98132.1| 414|Caenorhabditis elegans Hypothetical
protein F53B2.6 protein.
Length = 414
Score = 29.5 bits (63), Expect = 1.5
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 178 PRTQPP----PEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSD--KGAPKQA 339
P T PP P P++ H N R ARR P T++LLS+SS+ K P
Sbjct: 257 PPTPPPAAMLPTKNKYPTYHHDLNEECQRKARRRNHPRRGETQKLLSSSSECLKYYPVDM 316
Query: 340 ANVRPT 357
RPT
Sbjct: 317 PETRPT 322
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +1
Query: 166 PLVSPRTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLS-ASSDKGAPKQAA 342
P ++ + PPP IP H Y + PP + +++ S +GAP+
Sbjct: 285 PALNNYSIPPPPIPGQWQQPHVAAQYVPQSVSSYSQPPPAAAQGVVTQPGSFRGAPRGRG 344
Query: 343 NVRPTPG 363
N+R G
Sbjct: 345 NIRGRGG 351
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 411 VRITCLFIMFIPSIKVSRCRSHISSLFRSPFV*ASTKQFLGNINWRCNFASS 256
+++ + +F+ I + + SH S ++ STK +WR NF++S
Sbjct: 448 IQLRTIDSLFVDPIALKQMLSHNSKIYYDLLEKVSTKNSADECDWRKNFSNS 499
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 223 KHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAANVRPTP 360
+ H+Y+Y R ++V PP + S D P+Q N+ P
Sbjct: 279 RRTHSYWYKRP--KKVMPPSSSSSLKTSDDDDDSTPRQIKNLTVNP 322
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
protein 2 protein.
Length = 1338
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 363 SRCR-SHISSLFRSPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDFWRRL 187
S+C +H++S + + G + + S++ C I +V + + V+ F+R L
Sbjct: 866 SQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTFFRNL 925
Query: 186 GSRRNQWLKTKGICML 139
+ RN + +C+L
Sbjct: 926 QNVRNSIHRNLCLCLL 941
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -1
Query: 363 SRCR-SHISSLFRSPFV*ASTKQFLGNINWRCNFASSVSCVIVVVGMLVRGSVWDFWRRL 187
S+C +H++S + + G + + S++ C I +V + + V+ F+R L
Sbjct: 866 SQCSCTHLTSFAILMDISGQVGRLSGGLASALDVVSTIGCAISIVCLALSVCVFTFFRNL 925
Query: 186 GSRRNQWLKTKGICML 139
+ RN + +C+L
Sbjct: 926 QNVRNSIHRNLCLCLL 941
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,729,035
Number of Sequences: 27780
Number of extensions: 252196
Number of successful extensions: 770
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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