Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L21
(540 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95... 122 1e-28
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95... 122 1e-28
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 109 2e-24
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 107 6e-24
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 29 1.8
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 28 4.1
03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865 27 7.2
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 27 9.6
05_04_0349 + 20492334-20492494,20493245-20493324,20493951-204940... 27 9.6
03_06_0600 + 34988743-34989407,34990033-34990051 27 9.6
>08_01_0120 -
957365-957552,957642-957780,957847-957970,958398-958486
Length = 179
Score = 122 bits (295), Expect = 1e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 285 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 464
I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK
Sbjct: 113 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 172
Query: 465 VLPPNWK 485
LPP WK
Sbjct: 173 KLPPTWK 179
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/82 (51%), Positives = 49/82 (59%), Gaps = 17/82 (20%)
Frame = +2
Query: 89 KGISQSALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIG 217
KGIS SALPY+R+ P+WLK A DV +E I K KKG PSQIG
Sbjct: 31 KGISSSALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIG 90
Query: 218 VMLRDSHGVAQVRFVTGKKILR 283
V+LRD HG+ V+ VTG KILR
Sbjct: 91 VVLRDQHGIPLVKSVTGSKILR 112
>08_01_0119 -
951492-951679,951780-951918,952023-952095,952196-952218
Length = 140
Score = 122 bits (295), Expect = 1e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 285 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 464
I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK
Sbjct: 74 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133
Query: 465 VLPPNWK 485
LPP WK
Sbjct: 134 KLPPTWK 140
Score = 87.8 bits (208), Expect = 5e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +2
Query: 89 KGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 268
KGIS SA+PY+R+ P+W+K A DV+E I K KKG PSQIGV+LRD HG+ V+ VTG
Sbjct: 9 KGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTG 68
Query: 269 KKILR 283
KILR
Sbjct: 69 SKILR 73
>07_03_0978 +
23099690-23100108,23100530-23100564,23100868-23100926,
23101269-23101310,23102003-23102065,23102172-23102253,
23102570-23102609,23102657-23102753
Length = 278
Score = 109 bits (261), Expect = 2e-24
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +3
Query: 285 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 464
++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+
Sbjct: 74 VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133
Query: 465 VLPPNWK 485
+P +K
Sbjct: 134 KIPAFFK 140
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +2
Query: 89 KGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 268
KG+S S LPYRR+ P W+K +A +V+E I ++ KKG PSQIG +LRD+H V + VTG
Sbjct: 9 KGMSCSVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTG 68
Query: 269 KKILR 283
KILR
Sbjct: 69 GKILR 73
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 107 bits (257), Expect = 6e-24
Identities = 51/64 (79%), Positives = 55/64 (85%)
Frame = +3
Query: 285 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 464
I+KA GLAP + EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK
Sbjct: 131 ILKAHGLAPKILEDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTK 190
Query: 465 VLPP 476
LPP
Sbjct: 191 KLPP 194
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 158 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 280
+V+E I K K G SQIGV+LR HG+ V+ + KIL
Sbjct: 89 EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKIL 129
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 83 LDKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 232
LD+ ++ RRS +++ D +KE + GKK L +++ +L+D
Sbjct: 314 LDEELTSPGTLSRRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKD 363
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 68 VVCTLLDKGISQSALPYRRSVPTWLKLTADDVKEQIYK-LGKKGLTPS 208
++C+ ++KG+ S + + + K D+ ++YK + K GL PS
Sbjct: 424 LLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPS 471
>03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865
Length = 648
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 66 GSYARSWIRVSPSRRCLTA 122
G YARSW+R SR+ L A
Sbjct: 624 GGYARSWLRPKQSRQALDA 642
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 312 DLPEDLYYLIKK-AVAMRKHLERNRKDKDSKFRL 410
DLPE L++ AVA R LE++R D+ FR+
Sbjct: 24 DLPEQQPQLMENVAVAKRSRLEQHRTLSDNSFRV 57
>05_04_0349 +
20492334-20492494,20493245-20493324,20493951-20494020,
20494089-20494139,20494535-20494649,20495401-20496268,
20496453-20496628,20500217-20500276,20501617-20501694,
20501951-20502008,20502658-20502720,20503397-20503453,
20503599-20503661,20504081-20504454
Length = 757
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 57 RKHGSYARSWIRVSPSRRCLTAAVSLP 137
R G+ +W+R PS+RC+ A +P
Sbjct: 104 RYRGNRLTTWVREPPSKRCVKQAEFVP 130
>03_06_0600 + 34988743-34989407,34990033-34990051
Length = 227
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +1
Query: 61 NMGRMHAPG*GYLPVGAALPPQCPYLV---EIDCRRCKGTNLQTWKEGSHSLT-NWCNAE 228
N+ +H PG P + PP P I CR+C+G+ +G + CN
Sbjct: 134 NLSLLHPPGSAASPSVSCPPPPPPPPPGPRRISCRKCRGSFFTVVGDGVSGVNCVHCNRW 193
Query: 229 GFTWSCPSK 255
+ CP++
Sbjct: 194 VSLFPCPAR 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,862,732
Number of Sequences: 37544
Number of extensions: 275721
Number of successful extensions: 729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1198356516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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