Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L04
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0168 - 26115947-26116007,26116109-26116398,26116934-261172... 125 4e-29
06_03_1040 + 27082978-27083086,27083574-27083632,27083759-270838... 122 2e-28
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 117 7e-27
02_01_0549 - 4038699-4038753,4039225-4039514,4039673-4039970,404... 105 2e-23
03_01_0137 - 1082786-1082846,1083850-1084142,1084250-1084550,108... 96 2e-20
03_06_0210 + 32386438-32386452,32386543-32386617,32386716-323868... 95 6e-20
01_01_0768 - 5935319-5935417,5935536-5935583,5935721-5935780,593... 32 0.35
11_05_0078 - 18906900-18907082,18907104-18907337,18907429-189076... 31 0.80
02_02_0364 - 9457747-9458043,9459815-9459952,9460072-9460141,946... 31 0.80
06_03_1293 + 29077525-29078120,29078592-29078645,29078819-290789... 30 1.9
02_05_0953 - 33027007-33029079 28 5.6
03_05_0533 - 25332015-25332145,25332231-25332449,25332595-253327... 28 7.5
10_06_0169 + 11420115-11420163,11420922-11421041,11421938-114220... 27 9.9
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383... 27 9.9
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 27 9.9
>05_06_0168 -
26115947-26116007,26116109-26116398,26116934-26117234,
26117333-26117403,26118067-26118174,26118700-26118774,
26118901-26118959,26119119-26119179,26120979-26120990
Length = 345
Score = 125 bits (301), Expect = 4e-29
Identities = 76/182 (41%), Positives = 102/182 (56%), Gaps = 4/182 (2%)
Frame = +1
Query: 121 QTMATSSDTSEQNV--KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIG 294
+TM+TS S+ +S +P S F QQ LPAW+P+ T G V+ F +IGI FIP+G+
Sbjct: 3 ETMSTSGSESDSVAAKRSMKPKYSKFTQQELPAWKPLYTPGIVIGAFSLIGIIFIPIGLV 62
Query: 295 LLYFSDEVKEHVIDYT-YCMKDDMNVTCADFLKN-NTEEICTCHLPFNLTEDFKGEVYFY 468
+ S EV E V Y C+ + V F+++ T++ CT + + KG + Y
Sbjct: 63 SIAASQEVVELVDKYDGECVTANDKV---GFIQDTKTDKACT--RTITVPKPMKGPIQVY 117
Query: 469 YGLTNYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLF 648
Y L N+YQNHRRYVKSR D QL + + CDP A +E PI PCG IA SLF
Sbjct: 118 YQLENFYQNHRRYVKSRSDKQLRSKEFSSVIKTCDPEAISEGGA---PIVPCGLIAWSLF 174
Query: 649 ND 654
ND
Sbjct: 175 ND 176
>06_03_1040 +
27082978-27083086,27083574-27083632,27083759-27083833,
27083908-27084024,27084207-27084277,27084432-27084732,
27084949-27085238,27085779-27085833
Length = 358
Score = 122 bits (295), Expect = 2e-28
Identities = 70/165 (42%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Frame = +1
Query: 166 SRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYT- 342
++ P S F QQ LPA +PILT V+ FF++G+ F+PVG+ L + V E V Y
Sbjct: 32 TKMPKYSKFTQQELPACKPILTPKWVVSVFFLVGVIFVPVGVVSLLAAQNVVEIVDRYDD 91
Query: 343 YCMKDDMNVTCADFLKN-NTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSR 519
C+ +M +++N N + CT L +TED ++ YY L N+YQNHRRYVKSR
Sbjct: 92 ACVPANMTDNKLAYIQNPNISKECTRTL--TITEDMNQPIFVYYQLDNFYQNHRRYVKSR 149
Query: 520 DDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
+D QL +S C+P + +G KPI PCG IA SLFND
Sbjct: 150 NDGQLRDAAKANQTSACEP-EKTTADG--KPIVPCGLIAWSLFND 191
>09_06_0274 + 21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 117 bits (282), Expect = 7e-27
Identities = 72/177 (40%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Frame = +1
Query: 130 ATSSDTSEQNVKSR-RPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYF 306
++ D S VK R RP F QQ L A +PIL TV+ +G+ FIP+G+ +
Sbjct: 621 SSGEDGSAAAVKKRNRPKYHRFTQQELQACKPILIPQTVILVLVFVGLIFIPIGLACIAA 680
Query: 307 SDEVKEHVIDY-TYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTN 483
S++V E V Y T C+ +M F++N++ + TC F + +D K +Y YY L
Sbjct: 681 SNKVVELVDRYDTKCVPRNMLRNKVAFIQNSSIDK-TCTRVFKVPKDMKKPIYIYYQLDK 739
Query: 484 YYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
+YQNHRRYVKS +D QL + + C P A A NG +PI PCG IA SLFND
Sbjct: 740 FYQNHRRYVKSLNDMQLRNPKKVADTQYCSPEATA--NG--RPIVPCGLIAWSLFND 792
>02_01_0549 -
4038699-4038753,4039225-4039514,4039673-4039970,
4040779-4040849,4040966-4041079,4041166-4041240,
4041347-4041405,4041870-4041912
Length = 334
Score = 105 bits (253), Expect = 2e-23
Identities = 62/157 (39%), Positives = 82/157 (52%)
Frame = +1
Query: 184 SAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYTYCMKDDM 363
S F QQ LPA +PILT V+ F ++G+ F+P+G+ L S +V E V Y
Sbjct: 16 SKFTQQELPACKPILTPKWVISVFVLVGVIFVPIGLVSLKASRKVVEIVDRYDDACVPAN 75
Query: 364 NVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRDDNQLLGR 543
+++N T C + +D ++ YY L N+YQNHRRYVKSR D QL
Sbjct: 76 TTDKLAYIQNPTISK-NCRRTLKVPKDMDAPIFVYYQLDNFYQNHRRYVKSRSDAQLRDP 134
Query: 544 LSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
+S CDP A NG+ I PCG IA S+FND
Sbjct: 135 KKANDTSTCDPEGTA--NGM--AIVPCGLIAWSIFND 167
>03_01_0137 -
1082786-1082846,1083850-1084142,1084250-1084550,
1084792-1084862,1085008-1085115,1085205-1085279,
1085298-1085440,1087848-1088097
Length = 433
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/139 (39%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Frame = +1
Query: 241 VLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDY-TYCMKDDMNVTCADFLKNNTEEICTC 417
V+ TF +IGI F+P+G+ L S E+ E V Y T C+ + F++N T+ TC
Sbjct: 132 VVATFLLIGIIFVPIGLASLSASQEIVELVDRYDTNCVS---TLDKVGFIQN-TDTDKTC 187
Query: 418 HLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEEN 597
+ + K + YY + ++YQNHRRYVKSR D QL + ++ + DCDP +
Sbjct: 188 TRTLTVPKHMKSPIQIYYQIGDFYQNHRRYVKSRSDKQLRYKNAVHLTKDCDPEGNTVDG 247
Query: 598 GVMKPIAPCGAIANSLFND 654
PI PCG IA SLFND
Sbjct: 248 A---PIIPCGLIAWSLFND 263
>03_06_0210 +
32386438-32386452,32386543-32386617,32386716-32386832,
32387006-32387076,32387202-32387496,32387594-32387883,
32388122-32388137
Length = 292
Score = 94.7 bits (225), Expect = 6e-20
Identities = 58/145 (40%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = +1
Query: 226 LTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYTY-CMKDDMNVTCADFLKNNT- 399
+T G V+ F +IG+ F+PVG+ L+ S+ V E Y C+ + ++K+++
Sbjct: 1 MTPGCVITIFLMIGVTFVPVGLVCLHASNHVAEIAHRYDIDCVPNAYKRNRQAYIKDSSI 60
Query: 400 EEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPF 579
+ CT + + +Y YY L N+YQNHRRYVKSR D QL T SS CDP
Sbjct: 61 SKNCTQEVKVKYL--MRAPIYVYYELDNFYQNHRRYVKSRSDKQLRYGQKYTHSS-CDPI 117
Query: 580 ARAEENGVMKPIAPCGAIANSLFND 654
R +G+ PI PCG IA SLFND
Sbjct: 118 ER--NDGL--PIVPCGLIAWSLFND 138
>01_01_0768 -
5935319-5935417,5935536-5935583,5935721-5935780,
5935884-5935996,5936082-5936154,5936895-5936939,
5937020-5937133,5937227-5937253,5937963-5938247
Length = 287
Score = 32.3 bits (70), Expect = 0.35
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 271 AFIPVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC 411
A +PV L +++ KE VI YC D VT D +KN EE+C
Sbjct: 208 AILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLD-VKNFFEELC 253
>11_05_0078 -
18906900-18907082,18907104-18907337,18907429-18907653,
18907739-18907909,18907994-18908109,18908215-18908369,
18908450-18908573,18909007-18909107,18909215-18909297,
18909383-18909607,18909694-18909810,18910488-18910640
Length = 628
Score = 31.1 bits (67), Expect = 0.80
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 358 DMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
D+N+ C D +KN+ +E+ TCH + E Y +T++++
Sbjct: 569 DINILCVD-MKNSDDELMTCHFDPCIGEQALALAMAYQSVTDHHK 612
>02_02_0364 -
9457747-9458043,9459815-9459952,9460072-9460141,
9460928-9460995,9462451-9462582
Length = 234
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 241 VLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTCADF 384
VLP+FF + + IGL + D+ KE V DY + D+++T ++
Sbjct: 64 VLPSFFYWTVLAFELCIGLTCYQDDTKE-VHDYLKSLCPDLHITRGEY 110
>06_03_1293 +
29077525-29078120,29078592-29078645,29078819-29078970,
29079362-29079639
Length = 359
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 304 FSDEVKEHVIDYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTN 483
F D V+ H+ID D N+ D+ +T + + P +T D +GEV + N
Sbjct: 29 FYDTVEVHIIDDD--SDGDANIH-KDYSMEDTSKHLVMYNP-EITYDKQGEVEVTEPIDN 84
Query: 484 YYQNHRRYVKSR 519
Y ++RY+K R
Sbjct: 85 YTSLNQRYMKPR 96
>02_05_0953 - 33027007-33029079
Length = 690
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 316 VKEHVIDYTYCMKDDMNVTCA--DFLKNNTEEI 408
++ H+ Y C +DD N +CA D L E I
Sbjct: 168 IRAHIASYKVCWRDDGNASCATSDILAGMNEAI 200
>03_05_0533 -
25332015-25332145,25332231-25332449,25332595-25332754,
25332973-25333025,25334998-25335433
Length = 332
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 556 ELMTGGLKADCHPWILHIVYDSGNNWSVHNRNKLLL 449
+L+ G + W+ VY SG +VH++N L+
Sbjct: 188 KLLAGSVHVQSFDWVSPSVYGSGGKRAVHSKNTKLV 223
>10_06_0169 +
11420115-11420163,11420922-11421041,11421938-11422053,
11422125-11422213,11422413-11422455,11423296-11423440,
11423581-11423688,11423767-11424086,11424255-11424671,
11424776-11425470,11425564-11426107,11426338-11426682,
11426799-11426909
Length = 1033
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 577 MDHNQKMELMTGGLKADCHPWILHIVYDSGNNWSV 473
+ H+Q+ + +K H W+LH V D G SV
Sbjct: 617 LSHDQQDQYAENLIKEKLHVWLLHKVGDGGKGPSV 651
>04_01_0289 +
3830052-3831134,3831141-3831230,3831494-3831525,
3833690-3834623
Length = 712
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 283 VGIGLLYFSDEVKEHVIDYTYCM---KDDMNVTCADFLK 390
V G + SDEVKEHV Y M D M+ T D ++
Sbjct: 52 VNAGSIVISDEVKEHVFGYIQNMLRGVDSMSTTELDAIR 90
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 592 LQHVQMDHNQKMELMTGGLKADCHPWILHIVYDS 491
+ + ++DH + + L LK +C+ + +VYDS
Sbjct: 1226 IHNFKVDHKESLALAEKRLKYECNEELARLVYDS 1259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,090
Number of Sequences: 37544
Number of extensions: 288085
Number of successful extensions: 751
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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