Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_L04
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2407|AAF48613.1|  357|Drosophila melanogaster CG9947-PA...   243   2e-64
AY070652-1|AAL48123.1|  357|Drosophila melanogaster RH03777p pro...   242   3e-64
AY070651-1|AAL48122.1|  357|Drosophila melanogaster RH03711p pro...   242   3e-64
BT029417-1|ABK57074.1|  151|Drosophila melanogaster IP02577p pro...    31   1.8  
BT024430-1|ABC86492.1|  153|Drosophila melanogaster IP02578p pro...    31   1.8  
AF241152-1|AAF64469.1|  151|Drosophila melanogaster type 6 nucle...    31   1.8  
AF241151-1|AAF64467.1|  151|Drosophila melanogaster type 6 nucle...    31   1.8  
AE014298-2041|AAF48378.2|  151|Drosophila melanogaster CG5310-PA...    31   1.8  

>AE014298-2407|AAF48613.1|  357|Drosophila melanogaster CG9947-PA
           protein.
          Length = 357

 Score =  243 bits (594), Expect = 2e-64
 Identities = 113/178 (63%), Positives = 135/178 (75%), Gaps = 2/178 (1%)
 Frame = +1

Query: 127 MATSSDTSEQNV--KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLL 300
           M+T    +E++   KS+RP++SAFKQQRLPAWQP+LTA TVLPTFFVIG+ FIP+G+ LL
Sbjct: 1   MSTQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLL 60

Query: 301 YFSDEVKEHVIDYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLT 480
           + S+   E +IDYT C +   N TCA++L+ N    C C +PF L  DF G VY YYGLT
Sbjct: 61  HLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLT 120

Query: 481 NYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
           NYYQNHRRYVKSRDD QLLG LS TPS+DC PFA   ++G  KPIAPCGAIANSLFND
Sbjct: 121 NYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDSG--KPIAPCGAIANSLFND 176


>AY070652-1|AAL48123.1|  357|Drosophila melanogaster RH03777p
           protein.
          Length = 357

 Score =  242 bits (593), Expect = 3e-64
 Identities = 113/178 (63%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
 Frame = +1

Query: 127 MATSSDTSEQNV--KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLL 300
           M+T    +E++   KS+RP++SAFKQQRLPAWQP+LTA TVLPTFFVIG+ FIP+G+ LL
Sbjct: 1   MSTQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLL 60

Query: 301 YFSDEVKEHVIDYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLT 480
           + S+   E +IDYT C +   N TCA++L+ N    C C +PF L  DF G VY YYGLT
Sbjct: 61  HLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLT 120

Query: 481 NYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
           NYYQNHRRYVKSRDD QLLG LS TPS+DC PFA   + G  KPIAPCGAIANSLFND
Sbjct: 121 NYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDTG--KPIAPCGAIANSLFND 176


>AY070651-1|AAL48122.1|  357|Drosophila melanogaster RH03711p
           protein.
          Length = 357

 Score =  242 bits (593), Expect = 3e-64
 Identities = 113/178 (63%), Positives = 134/178 (75%), Gaps = 2/178 (1%)
 Frame = +1

Query: 127 MATSSDTSEQNV--KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLL 300
           M+T    +E++   KS+RP++SAFKQQRLPAWQP+LTA TVLPTFFVIG+ FIP+G+ LL
Sbjct: 1   MSTQQAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPTFFVIGVLFIPIGVVLL 60

Query: 301 YFSDEVKEHVIDYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLT 480
           + S+   E +IDYT C +   N TCA++L+ N    C C +PF L  DF G VY YYGLT
Sbjct: 61  HLSNTANELIIDYTKCRRSGGNTTCAEYLEANPGVTCPCEVPFVLPSDFNGVVYMYYGLT 120

Query: 481 NYYQNHRRYVKSRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
           NYYQNHRRYVKSRDD QLLG LS TPS+DC PFA   + G  KPIAPCGAIANSLFND
Sbjct: 121 NYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPDTG--KPIAPCGAIANSLFND 176


>BT029417-1|ABK57074.1|  151|Drosophila melanogaster IP02577p
           protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 VKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC-TCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
           +K HV+  TY M+    +   +F   + +E+C T  L      + KG+ +FY+ LT++  
Sbjct: 8   IKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGK-FFYHRLTSFMN 66

Query: 493 NHRRY 507
           +   Y
Sbjct: 67  SGPSY 71


>BT024430-1|ABC86492.1|  153|Drosophila melanogaster IP02578p
           protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 VKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC-TCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
           +K HV+  TY M+    +   +F   + +E+C T  L      + KG+ +FY+ LT++  
Sbjct: 10  IKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGK-FFYHRLTSFMN 68

Query: 493 NHRRY 507
           +   Y
Sbjct: 69  SGPSY 73


>AF241152-1|AAF64469.1|  151|Drosophila melanogaster type 6
           nucleoside diphosphatekinase protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 VKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC-TCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
           +K HV+  TY M+    +   +F   + +E+C T  L      + KG+ +FY+ LT++  
Sbjct: 8   IKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGK-FFYHRLTSFMN 66

Query: 493 NHRRY 507
           +   Y
Sbjct: 67  SGPSY 71


>AF241151-1|AAF64467.1|  151|Drosophila melanogaster type 6
           nucleoside diphosphatekinase protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 VKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC-TCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
           +K HV+  TY M+    +   +F   + +E+C T  L      + KG+ +FY+ LT++  
Sbjct: 8   IKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGK-FFYHRLTSFMN 66

Query: 493 NHRRY 507
           +   Y
Sbjct: 67  SGPSY 71


>AE014298-2041|AAF48378.2|  151|Drosophila melanogaster CG5310-PA
           protein.
          Length = 151

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 316 VKEHVIDYTYCMKDDMNVTCADFLKNNTEEIC-TCHLPFNLTEDFKGEVYFYYGLTNYYQ 492
           +K HV+  TY M+    +   +F   + +E+C T  L      + KG+ +FY+ LT++  
Sbjct: 8   IKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYAEHKGK-FFYHRLTSFMN 66

Query: 493 NHRRY 507
           +   Y
Sbjct: 67  SGPSY 71


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,279,100
Number of Sequences: 53049
Number of extensions: 522610
Number of successful extensions: 1399
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)