Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L04
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-13|AAO91705.1| 219|Caenorhabditis elegans Hypothetical p... 158 4e-39
U61953-12|AAC48073.1| 348|Caenorhabditis elegans Hypothetical p... 158 4e-39
Z68161-2|CAA92297.1| 361|Caenorhabditis elegans Hypothetical pr... 120 7e-28
Z67738-1|CAA91545.2| 352|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 29 2.2
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 29 2.2
AC006830-6|AAK68608.1| 186|Caenorhabditis elegans Hypothetical ... 28 5.0
Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical pr... 27 8.8
>U61953-13|AAO91705.1| 219|Caenorhabditis elegans Hypothetical
protein R08C7.2b protein.
Length = 219
Score = 158 bits (383), Expect = 4e-39
Identities = 84/167 (50%), Positives = 99/167 (59%)
Frame = +1
Query: 154 QNVKSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVI 333
+ V RP SA +QQ+LPAWQPILTA TV+PT FVIG F+P+G+ L SD V E +
Sbjct: 24 EKVLKNRPKASALRQQKLPAWQPILTATTVIPTVFVIGAIFLPIGVFLFIASDAVSEFTV 83
Query: 334 DYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVK 513
+YT C+ C L NL F G+V+ YY L NYYQNHRRYVK
Sbjct: 84 EYTNCLSP-------------------CQLQINLPNAFDGDVFLYYNLENYYQNHRRYVK 124
Query: 514 SRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
SR+D Q LG LT DC PF + KPIAPCGAIANS+FND
Sbjct: 125 SRNDQQYLG--DLTNVKDCAPF--DIDPATKKPIAPCGAIANSIFND 167
>U61953-12|AAC48073.1| 348|Caenorhabditis elegans Hypothetical
protein R08C7.2a protein.
Length = 348
Score = 158 bits (383), Expect = 4e-39
Identities = 84/167 (50%), Positives = 99/167 (59%)
Frame = +1
Query: 154 QNVKSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVI 333
+ V RP SA +QQ+LPAWQPILTA TV+PT FVIG F+P+G+ L SD V E +
Sbjct: 24 EKVLKNRPKASALRQQKLPAWQPILTATTVIPTVFVIGAIFLPIGVFLFIASDAVSEFTV 83
Query: 334 DYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVK 513
+YT C+ C L NL F G+V+ YY L NYYQNHRRYVK
Sbjct: 84 EYTNCLSP-------------------CQLQINLPNAFDGDVFLYYNLENYYQNHRRYVK 124
Query: 514 SRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
SR+D Q LG LT DC PF + KPIAPCGAIANS+FND
Sbjct: 125 SRNDQQYLG--DLTNVKDCAPF--DIDPATKKPIAPCGAIANSIFND 167
>Z68161-2|CAA92297.1| 361|Caenorhabditis elegans Hypothetical
protein F20C5.4 protein.
Length = 361
Score = 120 bits (290), Expect = 7e-28
Identities = 59/164 (35%), Positives = 88/164 (53%)
Frame = +1
Query: 163 KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYT 342
K +P ++ +KQQ+LPA +P + +P + G+A + +GI L + + E I YT
Sbjct: 14 KKNQPKDTPWKQQKLPALRPHYNITSAIPVTLITGVATLAMGIALYFGHNGSLEQEIVYT 73
Query: 343 YCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRD 522
C + + C L +D+ GEV FYYGL+ +YQN+R Y SR+
Sbjct: 74 DCALSNGTQASRIMRTEMGNQTFKCAYTITLNDDYTGEVKFYYGLSKFYQNNRLYFNSRN 133
Query: 523 DNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFND 654
D QL G+ +T + CDP + NG PIAPCG +A+S+FND
Sbjct: 134 DQQLRGK--VTETDGCDPLEYVDVNGTKVPIAPCGKVADSMFND 175
>Z67738-1|CAA91545.2| 352|Caenorhabditis elegans Hypothetical
protein W03G11.2 protein.
Length = 352
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +1
Query: 385 LKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRDDNQLLGRLSLTPSS 564
+++ + + ++ N+T VYFYY L + + HR ++ QL+ S+
Sbjct: 75 IRHRYDNVAEGYIDINITRFIPSPVYFYYELHDTFMMHRSLNQAYCKKQLI----TGESN 130
Query: 565 DCDPFARAE---ENGVMKPIAP 621
+CD F EN V + P
Sbjct: 131 ECDSFKNQNYSCENAVSRSFIP 152
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 307 SDEVKEHVIDYTYCMKDDMNVTCADFL-KNNTE-EICTCHLPFNLTEDFKGE 456
S++ ++ + D T D M+ A K NTE +C C LP T +FK +
Sbjct: 559 SNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNTAEFKAD 610
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 307 SDEVKEHVIDYTYCMKDDMNVTCADFL-KNNTE-EICTCHLPFNLTEDFKGE 456
S++ ++ + D T D M+ A K NTE +C C LP T +FK +
Sbjct: 559 SNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNTAEFKAD 610
>AC006830-6|AAK68608.1| 186|Caenorhabditis elegans Hypothetical
protein ZK105.1 protein.
Length = 186
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 280 PVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTC 375
P+ IG+ +DE+ E + CMK D+ TC
Sbjct: 130 PMSIGIPDMNDEICEKIFKRKDCMKKDIVKTC 161
>Z73906-1|CAA98114.1| 540|Caenorhabditis elegans Hypothetical
protein D2030.1 protein.
Length = 540
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Frame = +1
Query: 217 QPILTAGTV-LPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTCADFLKN 393
Q ++ G + L T + F+P G LYF +E HV D +++++ D L+
Sbjct: 8 QLVVCVGVMFLLTVCITAFFFLPSGGADLYFREENSVHVRD--VLIREEIRRKEQDELRR 65
Query: 394 NTEEICTCHLP---FNLTEDFKGEVYFYYGLTNY-YQNHRRY 507
EE +P ++D +G F + + + +R+Y
Sbjct: 66 KAEEANPIPIPKPEIGASDDAEGRRIFVKQMIKFAWDGYRKY 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,579
Number of Sequences: 27780
Number of extensions: 286432
Number of successful extensions: 760
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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