Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L02
(523 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95... 122 1e-28
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95... 122 1e-28
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009... 109 2e-24
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 107 5e-24
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821... 35 0.046
05_03_0230 - 10687056-10687059,10687108-10687203,10688392-106885... 30 0.98
03_06_0600 + 34988743-34989407,34990033-34990051 29 3.0
06_03_0742 + 24027506-24027721,24028835-24029004,24029893-240300... 27 6.9
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 27 6.9
10_07_0062 - 12499872-12501350 27 9.1
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 27 9.1
04_04_0440 - 25219961-25221529 27 9.1
01_05_0356 - 21338488-21340062 27 9.1
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808... 27 9.1
>08_01_0120 -
957365-957552,957642-957780,957847-957970,958398-958486
Length = 179
Score = 122 bits (295), Expect = 1e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK
Sbjct: 113 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 172
Query: 457 VLPPNWK 477
LPP WK
Sbjct: 173 KLPPTWK 179
Score = 65.7 bits (153), Expect = 2e-11
Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 17/77 (22%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIGVMLRD 224
SALPY+R+ P+WLK A DV +E I K KKG PSQIGV+LRD
Sbjct: 36 SALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIGVVLRD 95
Query: 225 SHGVAQVRFVTGKKILR 275
HG+ V+ VTG KILR
Sbjct: 96 QHGIPLVKSVTGSKILR 112
>08_01_0119 -
951492-951679,951780-951918,952023-952095,952196-952218
Length = 140
Score = 122 bits (295), Expect = 1e-28
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK
Sbjct: 74 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133
Query: 457 VLPPNWK 477
LPP WK
Sbjct: 134 KLPPTWK 140
Score = 80.2 bits (189), Expect = 9e-16
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SA+PY+R+ P+W+K A DV+E I K KKG PSQIGV+LRD HG+ V+ VTG KILR
Sbjct: 14 SAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 73
>07_03_0978 +
23099690-23100108,23100530-23100564,23100868-23100926,
23101269-23101310,23102003-23102065,23102172-23102253,
23102570-23102609,23102657-23102753
Length = 278
Score = 109 bits (261), Expect = 2e-24
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+
Sbjct: 74 VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133
Query: 457 VLPPNWK 477
+P +K
Sbjct: 134 KIPAFFK 140
Score = 73.7 bits (173), Expect = 8e-14
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
S LPYRR+ P W+K +A +V+E I ++ KKG PSQIG +LRD+H V + VTG KILR
Sbjct: 14 SVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILR 73
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 107 bits (257), Expect = 5e-24
Identities = 51/64 (79%), Positives = 55/64 (85%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+KA GLAP + EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK
Sbjct: 131 ILKAHGLAPKILEDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTK 190
Query: 457 VLPP 468
LPP
Sbjct: 191 KLPP 194
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 150 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 272
+V+E I K K G SQIGV+LR HG+ V+ + KIL
Sbjct: 89 EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKIL 129
>01_06_1243 -
35681569-35681712,35681799-35681904,35682054-35682149,
35682234-35682361,35683000-35683260,35683343-35683428,
35683524-35683616,35683720-35683815,35683946-35684300
Length = 454
Score = 34.7 bits (76), Expect = 0.046
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 134 QPGRDTAAVRQRRXGRYPYQERAYDPCLRLFT 39
+P +TA+++ GRYP+ RAYDPC ++
Sbjct: 281 KPCNNTASLKLGLGGRYPWLSRAYDPCTERYS 312
>05_03_0230 -
10687056-10687059,10687108-10687203,10688392-10688519,
10688688-10688966,10689290-10689375,10689655-10689750,
10689859-10690243
Length = 357
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 119 TAAVRQRRX--GRYPYQERAYDPCLRLFT 39
+AA RQRR G YP+ +YDPC ++
Sbjct: 269 SAAARQRRLKQGHYPWMTGSYDPCTERYS 297
>03_06_0600 + 34988743-34989407,34990033-34990051
Length = 227
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +2
Query: 53 NMGRMHAPGKGISQXGAALPPQCPYLV---EIDCRRCKGTNLQTWKEGSHSLT-NWCNAE 220
N+ +H PG S + PP P I CR+C+G+ +G + CN
Sbjct: 134 NLSLLHPPGSAASPSVSCPPPPPPPPPGPRRISCRKCRGSFFTVVGDGVSGVNCVHCNRW 193
Query: 221 GFTWSCPSK 247
+ CP++
Sbjct: 194 VSLFPCPAR 202
>06_03_0742 +
24027506-24027721,24028835-24029004,24029893-24030052,
24030162-24030455,24031490-24031717,24031827-24032006,
24032079-24032238,24032591-24032617,24033426-24033613,
24034269-24034532,24035123-24035218,24035311-24035399,
24035473-24035620,24035842-24036051,24036141-24036440,
24037906-24038248,24038747-24038952,24039071-24039273,
24040021-24040117,24040148-24040222,24040328-24040602,
24041116-24041256,24041469-24042339,24042481-24042520,
24042605-24043050
Length = 1808
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 111 RRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 224
RRS +++ D +KE + GKK L +++ +L+D
Sbjct: 326 RRSTNETRRISDDTIKEMVASSGKKHLLTTEVESILKD 363
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 44 KAANMGRMHAPGKGISQXGAALPPQCPYLVEIDCRRCKGTNLQ 172
KAA + H P G ++ G +PP+ + + RR L+
Sbjct: 238 KAARLDHQHGPVAGAAENGGDVPPEVAAVAAVGERRTTSVALR 280
>10_07_0062 - 12499872-12501350
Length = 492
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 60 VVCTLLVRVSPXSALPYRRSVPTWLKLTAD 149
V+C +LVR+ S L R W +LT+D
Sbjct: 150 VLCEILVRLPARSVLRCRAVCTAWRRLTSD 179
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 304 DLPEDLYYLIKK-AVAMRKHLERNRKDKDSKFRL 402
DLPE L++ AVA R LE++R D+ FR+
Sbjct: 24 DLPEQQPQLMENVAVAKRSRLEQHRTLSDNSFRV 57
>04_04_0440 - 25219961-25221529
Length = 522
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +2
Query: 44 KAANMGRMHAPGKGISQXGA-ALPPQCPYLVEIDCRRCKGT------NLQTWKEGSHSLT 202
+ A + ++ G +S G AL CP LV++ +RC+G NL+ + GS S++
Sbjct: 392 RCAALKKLCIKGCPVSDRGMWALNGGCPSLVKVKLKRCRGVSYECIENLKVVRGGSFSIS 451
>01_05_0356 - 21338488-21340062
Length = 524
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 128 GRDTAAVRQRRXGRYPYQERAYDPCLRLFTKSPI 27
G+D +A+ + GR PY + +RL + P+
Sbjct: 356 GKDQSAIEEHDAGRLPYLQAVLKESMRLHSVGPL 389
>01_01_1024 +
8083372-8083758,8083970-8084149,8084261-8084590,
8084679-8084792,8084942-8085682
Length = 583
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 111 GKAAPXWEIPLPGACIRPMFA 49
G AP +++PLPG + P FA
Sbjct: 444 GAPAPQFQVPLPGGGMAPAFA 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,496,366
Number of Sequences: 37544
Number of extensions: 260166
Number of successful extensions: 737
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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