Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L02
(523 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 136 4e-32
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 136 4e-32
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 136 4e-32
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 136 4e-32
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 136 4e-32
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 136 4e-32
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 136 4e-32
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 136 4e-32
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 119 5e-27
AM083042-1|CAL07188.1| 97|Homo sapiens immunoglobulin heavy ch... 30 5.7
AY393389-1|AAR32442.1| 142|Homo sapiens immunoglobulin heavy ch... 29 9.9
AM082392-1|CAL06538.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.9
AM082016-1|CAL06162.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.9
AM081473-1|CAL05619.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.9
AF082195-1|AAC36103.1| 117|Homo sapiens anti-pneumococcal/anti-... 29 9.9
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 136 bits (329), Expect = 4e-32
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 456
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 457 VLPPNWKYE 483
VLPPNWKYE
Sbjct: 134 VLPPNWKYE 142
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 0.80
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 56 MGRMHAPGKGISQXGAALP 112
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 119 bits (287), Expect = 5e-27
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 96 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 275
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 3 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 62
Score = 99.5 bits (237), Expect = 6e-21
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = +1
Query: 277 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 438
I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 63 ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>AM083042-1|CAL07188.1| 97|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 97
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 194 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV 295
SL C A GFT+S S +RNW + P +WV
Sbjct: 20 SLRLSCAASGFTFS--SYVRNWVRQSPGKGLEWV 51
>AY393389-1|AAR32442.1| 142|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 142
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 188 SHSLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV 295
+ +LT C GF++S NW + PP +W+
Sbjct: 3 TQTLTLTCTFSGFSFSTSGVCANWIRQPPGKALEWL 38
>AM082392-1|CAL06538.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 194 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV*LLTYR 313
SL C A GF++S S NW + P +WV +++YR
Sbjct: 20 SLRLSCAASGFSFS--SYAMNWVRQAPGKGLEWVSVMSYR 57
>AM082016-1|CAL06162.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 194 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV 295
SL C A GFT+S S NW + PP +WV
Sbjct: 20 SLRLSCAASGFTFS--SYAMNWVRQPPGKGLEWV 51
>AM081473-1|CAL05619.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 194 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV 295
SL C A GFT+S S NW + PP +WV
Sbjct: 20 SLRLSCAASGFTFS--SYAMNWVRQPPGKGLEWV 51
>AF082195-1|AAC36103.1| 117|Homo sapiens
anti-pneumococcal/anti-dsDNA Ig H-chain Fab fragment
protein.
Length = 117
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 194 SLTNWCNAEGFTWSCPSKIRNWQKDPPXS*RQWV*LL 304
SL C A GFT+S S NW + PP +WV L+
Sbjct: 11 SLRLSCAASGFTFS--SYEMNWVRQPPGKGLEWVGLI 45
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,902,915
Number of Sequences: 237096
Number of extensions: 1451257
Number of successful extensions: 4182
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4182
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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