Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_L01
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 31 0.78
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 31 1.0
02_01_0170 - 1174224-1174321,1174429-1174588,1174673-1174823,117... 30 1.8
01_06_1809 - 40029628-40030539 30 1.8
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 29 2.4
07_03_0557 + 19447367-19447517,19447630-19447730,19448359-194484... 29 2.4
08_01_0133 + 1062365-1063057,1063210-1063318,1063914-1064005,106... 29 3.2
06_01_1166 + 9931955-9933406 29 3.2
04_04_0057 + 22410167-22411330 29 3.2
07_03_1038 - 23449764-23450204 29 4.2
03_06_0715 + 35693002-35694585 29 4.2
09_02_0140 + 4879319-4879968,4881443-4881942,4884230-4884368,488... 28 5.5
02_04_0311 + 21936812-21937861 28 7.3
09_03_0023 + 11617562-11617692,11617773-11617844,11620438-116205... 27 9.7
03_03_0256 + 15898702-15900420 27 9.7
03_02_0647 + 10154668-10156041 27 9.7
01_06_1613 + 38643833-38643974,38644054-38644190,38644828-386452... 27 9.7
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = -2
Query: 603 QFFSGLRGHQKDLKLEPLPGVVGPRVQELQKCF----RRSKGGQL-FPLTSWRKYSPDTY 439
Q F+ R H + L L +V ++ + +R KG QL P T+W K P+T
Sbjct: 606 QSFAAARAHAQPLPLPRSRAMVARTASDITESKVVLEKRGKGQQLPLPTTNWVKERPETT 665
Query: 438 QPV 430
+PV
Sbjct: 666 EPV 668
>10_08_0324 +
16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 618 FEFPQQFFSGLRGHQKDLKLEPLPGVVGP 532
F+ FFSG+R ++D+ ++ L G+ GP
Sbjct: 552 FDVSTAFFSGVRASRRDINMKGLDGIQGP 580
>02_01_0170 -
1174224-1174321,1174429-1174588,1174673-1174823,
1175005-1175156,1175647-1175768,1176773-1176785
Length = 231
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +3
Query: 411 SKDITMALADMYLENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFGDLAA 590
S+D A+ E + S W +E V+ + E+ E E PP A P G AA
Sbjct: 6 SEDFQPAVPSAKAEPLKSKWADEDVEEDDVKESWEEEEEEKPKPPPVEKTAPKPSGKGAA 65
>01_06_1809 - 40029628-40030539
Length = 303
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -1
Query: 616 RIPAAVLQWAARSPKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEKIFSRYIS 437
R+ A W + SPK + + GG G +S S + +S + FSR S
Sbjct: 62 RLRRAASAWMSASPKPAASNSGGGGGGGATLSSSNSGSNHSNKYNYSPGEAAAAFSRTFS 121
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 633 STINRFEFPQQFFSGLRGHQKDLKLEPLPGVV 538
S+ + ++ P + SG R QKDL LEP+P ++
Sbjct: 1697 SSADGYDNPNELDSGERRIQKDLGLEPIPSML 1728
>07_03_0557 +
19447367-19447517,19447630-19447730,19448359-19448480,
19448725-19448912,19449000-19449178,19449370-19449711,
19449795-19449859,19450259-19450317,19450486-19450573,
19450653-19450722,19450759-19450992,19451072-19451411,
19451643-19451691,19452690-19452780,19453077-19453442
Length = 814
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +3
Query: 456 IFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFGD 581
IFSN L++KV SIF + P P PP A PF D
Sbjct: 608 IFSNLLDKKV---SIFSKKNAKPTTEVPPPPPPSSAPGPFDD 646
>08_01_0133 +
1062365-1063057,1063210-1063318,1063914-1064005,
1064399-1064560,1064718-1064834,1065029-1065127
Length = 423
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = -1
Query: 631 HHKPFRIPAAVLQWAARSPKGLEARTAA--GGCGSTRSGTSEMFSKIEGRSTFSS 473
H P AA A SP A + GGC T S S FS +FSS
Sbjct: 82 HPAPLLAAAAAAAAAVASPHAALALSGGSMGGCSDTSSSYSSSFSSSSSSDSFSS 136
>06_01_1166 + 9931955-9933406
Length = 483
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -1
Query: 604 AVLQWAARS----PKGLEARTAAGGCGSTRSGTSEMFSKIEGRS 485
A WAA S P+G E R AAGG G+ G + S + R+
Sbjct: 317 AAFVWAAGSHTALPEGFEERAAAGGRGTVIRGWAPQLSALRHRA 360
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 468 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 572
WLE +V P N+ + P P P AA + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198
>07_03_1038 - 23449764-23450204
Length = 146
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 98 PALGSPPYVCRTLMCHLDAV 157
P G+PP +C L+C L+AV
Sbjct: 39 PVWGTPPLLCGELLCRLEAV 58
>03_06_0715 + 35693002-35694585
Length = 527
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 408 LSKDITMALADMYLENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS 566
L + +T+A A Y F W++E E+ S +P V P PP + +S
Sbjct: 454 LVEGMTVAEAASYCNAAFKAWMDECDRCRKCGEDGSHIPTVVKPPPPPSTSSS 506
>09_02_0140 +
4879319-4879968,4881443-4881942,4884230-4884368,
4886005-4886156,4886267-4886532,4886902-4887028,
4887111-4887179,4887270-4887518,4887636-4888012
Length = 842
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 406 CSRRTLRWHWLICIWRIFSP 465
C +TL W WL C + I SP
Sbjct: 405 CVPKTLAWDWLTCSYAISSP 424
>02_04_0311 + 21936812-21937861
Length = 349
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 468 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFGDLAA 590
WLE V P N+ + P P PPA +SSP AA
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAA 191
>09_03_0023 +
11617562-11617692,11617773-11617844,11620438-11620595,
11620677-11620939,11621041-11621167,11621748-11621816,
11621931-11622120,11622309-11622672
Length = 457
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -2
Query: 402 YISQVFLVIYFYSYNSLKTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQY 247
Y S+ + Y Y S T F +++ G SLNW R R L+ + Y
Sbjct: 226 YCSEKAHLALVYEYMSGGTLFDHLRDKTGVGESLNWASRVRILLEAAQGLDY 277
>03_03_0256 + 15898702-15900420
Length = 572
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -2
Query: 375 YFYSYNSLKTKFKSIQNYRGQCYSLNWNPRGRALVVVVEW 256
+F+ + S + +FK+++ + G C W+P + V W
Sbjct: 527 WFWDWKSCR-RFKTLKCHNGVCIGCEWHPLETSKVATCGW 565
>03_02_0647 + 10154668-10156041
Length = 457
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 622 PFRIPAAVLQWAARSPKGLEARTAAGGCGSTRSGTSEMFSKIEGR 488
PF P AVL WAA S ++ + G RS EM ++ +GR
Sbjct: 277 PFPSPRAVLDWAAASMSDSDSDDSGG--AEARS-EHEMMARAKGR 318
>01_06_1613 +
38643833-38643974,38644054-38644190,38644828-38645207,
38645487-38645583,38645685-38645972,38646683-38647648
Length = 669
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 585 RGHQKDLKLEPLPGVVGPRVQELQK 511
+ Q + KL+PLPG+ G V+ L+K
Sbjct: 523 KAEQYEKKLKPLPGLKGINVESLEK 547
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,872
Number of Sequences: 37544
Number of extensions: 369255
Number of successful extensions: 1053
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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