Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_L01
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   1.6  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   8.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.3  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   8.3  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = +3

Query: 420 ITMALADMYLENIFSNWLEEKVDLPSIFENISEVPER 530
           +T+A+  M L ++F+     K+D+PS F+    +P+R
Sbjct: 764 VTIAIFSMTLLDVFTRIATPKLDVPSEFKR--TIPDR 798


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 113 PPYVCRTLMCHLD 151
           PPY+CR L  +LD
Sbjct: 568 PPYLCRLLRSYLD 580


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +3

Query: 453 NIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASS 569
           ++ S+ + E     + F N+S VP     +PPA +  ++
Sbjct: 367 HVKSHTISELSPFTTYFVNVSAVPTDYSYKPPAKITVTT 405


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 598 LQWAARSPKGLEARTAAGGCGSTRSGTSEM 509
           L+ A R P+GL+    A G    R    EM
Sbjct: 768 LEEAIRGPQGLQGEKGAPGIQGIRGDKGEM 797


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 598 LQWAARSPKGLEARTAAGGCGSTRSGTSEM 509
           L+ A R P+GL+    A G    R    EM
Sbjct: 3   LEEAIRGPQGLQGEKGAPGIQGIRGDKGEM 32


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,164
Number of Sequences: 2352
Number of extensions: 14236
Number of successful extensions: 66
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)