Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_L01
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000614-1|BAA91288.1|  216|Homo sapiens protein ( Homo sapiens ...    31   2.7  
Y12040-1|CAA72771.1|   92|Homo sapiens immunoglobulin heavy chai...    30   6.1  

>AK000614-1|BAA91288.1|  216|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20607 fis, clone KAT06217. ).
          Length = 216

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 14/37 (37%), Positives = 26/37 (70%)
 Frame = -1

Query: 553 AAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEKIFSRY 443
           AAG  G+  S + E+  ++EG++ FSS+Q+E++  R+
Sbjct: 50  AAGTMGAAHSASEEV-RELEGKTGFSSDQIEQLHRRF 85


>Y12040-1|CAA72771.1|   92|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 92

 Score = 30.3 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = -1

Query: 598 LQWAARSP-KGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEKI 455
           +QW  R+P KGLE          T  GT+E  + ++GR T SS+  + I
Sbjct: 10  MQWICRAPGKGLE--WVGFTKNKTNRGTTEYAASVKGRFTISSDDSKSI 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,148,665
Number of Sequences: 237096
Number of extensions: 2010560
Number of successful extensions: 6770
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6769
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)