SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_L01
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92775-3|CAB62778.2|  396|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AB070577-1|BAC66472.1|  396|Caenorhabditis elegans L-3,4-dihydro...    32   0.30 
Z68011-2|CAA92013.2|  381|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC087081-6|AAG37976.1|  301|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z81563-1|CAB04563.1|  257|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U80837-7|AAB37907.1|  760|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ...    29   3.7  
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ...    29   3.7  
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ...    29   3.7  
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote...    29   3.7  
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote...    29   3.7  
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote...    29   3.7  
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote...    29   3.7  
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote...    29   3.7  
AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm rec...    29   3.7  
Z74045-1|CAA98552.1|  535|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z93393-13|CAD18880.1|  149|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z93393-12|CAD18879.1|  268|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical p...    28   6.5  
AL117207-21|CAN99696.1|  255|Caenorhabditis elegans Hypothetical...    28   6.5  
AL117207-20|CAB60403.3|  228|Caenorhabditis elegans Hypothetical...    28   6.5  
AL033514-4|CAA22094.2|  827|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF088287-1|AAC98294.1|  149|Caenorhabditis elegans caspase-relat...    28   6.5  
AF088286-1|AAC98293.1|  268|Caenorhabditis elegans caspase-relat...    28   6.5  
AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-relat...    28   6.5  
Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z92775-3|CAB62778.2|  396|Caenorhabditis elegans Hypothetical
           protein C06H5.7 protein.
          Length = 396

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 309 YSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQLQR*WHF 163
           Y L W+   R +VVV+E F  G        S+C L  + LF + + +H+
Sbjct: 97  YVLTWHDINRDMVVVIESFFIG-SFWSAMVSYCSLSVLKLFAVWKPFHY 144


>AB070577-1|BAC66472.1|  396|Caenorhabditis elegans
           L-3,4-dihydroxyphenylalanine receptorprotein.
          Length = 396

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -2

Query: 309 YSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQLQR*WHF 163
           Y L W+   R +VVV+E F  G        S+C L  + LF + + +H+
Sbjct: 97  YVLTWHDINRDMVVVIESFFIG-SFWSAMVSYCSLSVLKLFAVWKPFHY 144


>Z68011-2|CAA92013.2|  381|Caenorhabditis elegans Hypothetical
           protein T21B6.2 protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 414 KDITMALADMYLENIFSNWLEEKVDLPSIFENISEV 521
           KD+   + + Y    F NW++EKV+  S+ + I+E+
Sbjct: 190 KDVYNVILEHYNGLPFPNWIDEKVNGKSLLDTIAEI 225


>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
           protein R09A8.1 protein.
          Length = 1095

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
 Frame = -2

Query: 618 FEFP---QQFFSGLRGHQKDLKLEPLPGVVGPRVQELQKCFRRSKGGQLFPLTSWRKYSP 448
           ++FP   Q  +S    H+KD        +    ++      +  K  +L     W+K   
Sbjct: 488 YQFPRPNQSCYSSTSSHRKDSMTTDSKEITSSDMEVYSFAIKEGKCFRLKRYMEWKKDEK 547

Query: 447 DTYQPVPS*CPSRALYISQVFLVIYFYS 364
           D+   V S  PS  +Y      VIYF S
Sbjct: 548 DSEHAVVSRRPSFRIYCEFATNVIYFSS 575


>U53340-3|AAA96208.1|  578|Caenorhabditis elegans Hypothetical
           protein F02E8.5 protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -2

Query: 378 IYFYSYNSLKTKFKSIQNYRGQCYSLNWNPRGRALV 271
           I+ ++ NS K + +   N     +SL+WNP G  L+
Sbjct: 531 IFVWNRNSTKLEKQLCSNSENAIFSLSWNPTGYGLL 566


>AC087081-6|AAG37976.1|  301|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.11 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/58 (24%), Positives = 32/58 (55%)
 Frame = +3

Query: 360 YNYRSK*LKRLGIYIVLSKDITMALADMYLENIFSNWLEEKVDLPSIFENISEVPERV 533
           YN + K +KR     ++  D+ + L +   +  FS  +E+K+D+ +  +N+ +V + +
Sbjct: 81  YNEKEKIIKRESCLKIVFNDLEILLNNSLSKFSFSVHIEDKLDIINALKNVLKVKKSI 138


>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576


>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
           protein ZK1151.1h protein.
          Length = 3424

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
           protein ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
           protein ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
           protein ZK1151.1a protein.
          Length = 3436

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
           protein ZK1151.1g protein.
          Length = 4410

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
           protein ZK1151.1f protein.
          Length = 3322

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
           protein ZK1151.1e protein.
          Length = 3323

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336


>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
           protein ZK1151.1d protein.
          Length = 3405

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418


>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
           protein ZK1151.1i protein.
          Length = 1497

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576


>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
           protein ZK1151.1h protein.
          Length = 3424

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
           protein ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
           protein ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
           protein ZK1151.1a protein.
          Length = 3436

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
           protein ZK1151.1g protein.
          Length = 4410

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
           protein ZK1151.1f protein.
          Length = 3322

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
           protein ZK1151.1e protein.
          Length = 3323

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336


>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
           protein ZK1151.1d protein.
          Length = 3405

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418


>Z81563-1|CAB04563.1|  257|Caenorhabditis elegans Hypothetical
           protein K04H8.1 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 592 WAARSPKGLEARTAAGGCGSTRSGTSE 512
           WA   P G+     AGGC   R GT E
Sbjct: 198 WADNQPSGMRDNKGAGGCIVFRVGTKE 224


>U80837-7|AAB37907.1|  760|Caenorhabditis elegans Hypothetical
           protein F07E5.8 protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = -2

Query: 489 GQLFPLTSWRKYSPDTYQPVPS*CPSRALYISQVFLVIYFYSYNSLKTKFKSIQNYRGQC 310
           G L  +  + K   D +    +   S+ +Y S  F   YF  +N+++  + SI N     
Sbjct: 52  GNLEAVEKYDKAKADVFIKQFNDTKSKLVYSSDHF---YFLYWNTIQLIWNSISNLSMHS 108

Query: 309 YSLNWNPRGRALVVVVEWFQYG 244
            ++ WN         +EWF+ G
Sbjct: 109 ENIRWNDIADISNWNIEWFKGG 130


>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
           protein ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
           protein ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
           protein ZK1151.1g protein.
          Length = 4410

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
           protein.
          Length = 3522

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
           protein.
          Length = 3436

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
           protein.
          Length = 3436

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
           protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
           protein.
          Length = 3436

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +3

Query: 477 EKVDLPSIFENISEVPERVDPQPPAAV 557
           EK+DL  I + I +V  RVD  PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449


>AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 28 protein.
          Length = 338

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 511 MFSKIEGRSTFSSNQLEKIFSRYISASAIVMSFES-TIYIPSLFSY 377
           M+ +IEG ++ +SNQ +K+  ++  A    ++      +IPS F Y
Sbjct: 223 MYRRIEGNASSTSNQYQKLQHQFFKALIYQLAAPCICFHIPSFFFY 268


>Z74045-1|CAA98552.1|  535|Caenorhabditis elegans Hypothetical
           protein T27F2.1 protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -1

Query: 643 LTRQHHKPFRIPAAVLQWAARSPKG----LEARTAAGGCGSTRSGTSEMFSKI 497
           +T +    ++IP  +  W  ++PKG    L+ R AA G G  ++  +E F+K+
Sbjct: 240 MTAKDQNDWKIPPCISNW--KNPKGFTVGLDKRLAADGRGLQQTHINENFAKL 290


>Z93393-13|CAD18880.1|  149|Caenorhabditis elegans Hypothetical
           protein Y48E1B.13c protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 3   RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 56


>Z93393-12|CAD18879.1|  268|Caenorhabditis elegans Hypothetical
           protein Y48E1B.13b protein.
          Length = 268

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 3   RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 56


>Z93393-11|CAB07698.2|  536|Caenorhabditis elegans Hypothetical
           protein Y48E1B.13a protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 271 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 324


>AL117207-21|CAN99696.1|  255|Caenorhabditis elegans Hypothetical
           protein Y60A3A.19b protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -2

Query: 552 LPGVVGPRVQELQKCFRRSKGGQLFPLTSWRKYSPDTYQPVPS*CPSRALYISQVFLV-I 376
           +P VV   +  L   FR    G     T W  YS  T   V      + L +  VFL+ I
Sbjct: 187 IPLVVTSLITPLFSSFRLLSNGLGMFGTIWSVYSAGTLLCVDELQAKKPLVVYPVFLLYI 246

Query: 375 YFYSYNS 355
           YFYS  S
Sbjct: 247 YFYSLYS 253


>AL117207-20|CAB60403.3|  228|Caenorhabditis elegans Hypothetical
           protein Y60A3A.19a protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
 Frame = -2

Query: 552 LPGVVGPRVQELQKCFRRSKGGQLFPLTSWRKYSPDTYQPVPS*CPSRALYISQVFLV-I 376
           +P VV   +  L   FR    G     T W  YS  T   V      + L +  VFL+ I
Sbjct: 160 IPLVVTSLITPLFSSFRLLSNGLGMFGTIWSVYSAGTLLCVDELQAKKPLVVYPVFLLYI 219

Query: 375 YFYSYNS 355
           YFYS  S
Sbjct: 220 YFYSLYS 226


>AL033514-4|CAA22094.2|  827|Caenorhabditis elegans Hypothetical
           protein Y75B8A.3 protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 225 RDVRFL-GRIETTPRRQPTLDLEDSSLENNTAPYSFELI*T 344
           RD  FL G I++   R+P + +   ++++  A Y+F+LI T
Sbjct: 371 RDTSFLPGSIDSLTTRRPNIPIIIGTVQDEDADYAFKLINT 411


>AF088287-1|AAC98294.1|  149|Caenorhabditis elegans caspase-related
           protein 1C protein.
          Length = 149

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 3   RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 56


>AF088286-1|AAC98293.1|  268|Caenorhabditis elegans caspase-related
           protein 1B protein.
          Length = 268

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 3   RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 56


>AF088285-1|AAC98292.1|  536|Caenorhabditis elegans caspase-related
           protein 1A protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 351 KTKFKSIQNYRGQCYSLNWNPRGRALVVVVEWFQYGRGI*RLFTSFCELKTISLFQ 184
           +T  K   +    CY +N NPRG  L++  E F+      R+ T   E+    LFQ
Sbjct: 271 RTDAKKSNHKHKYCYEMNSNPRGTVLILSNENFKNMER--RVGTKQDEVNLTKLFQ 324


>Z79598-2|CAB01864.1|  738|Caenorhabditis elegans Hypothetical
           protein C44H4.2 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 377 FTSIVIIVLKLSSNQFKTIGGSVI 306
           FT+  I+VL LSSN+ KT+   +I
Sbjct: 289 FTNSSIVVLVLSSNELKTLTAGII 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,815,556
Number of Sequences: 27780
Number of extensions: 308808
Number of successful extensions: 995
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -