Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_K23
(465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 42 6e-05
SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces po... 30 0.20
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 1.4
SPBC16E9.19 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 1.4
SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner mem... 27 1.4
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 1.9
SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces ... 27 1.9
SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 26 2.5
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 2.5
SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr 3... 26 3.3
SPAC1002.16c |||nicotinic acid plasma membrane transporter |Schi... 25 4.3
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 25 5.7
SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyc... 25 7.5
SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces pom... 25 7.5
SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|c... 25 7.5
SPAC20G4.04c |hus1||checkpoint clamp complex protein Hus1|Schizo... 24 9.9
SPBC725.10 |||tspO homolog|Schizosaccharomyces pombe|chr 2|||Manual 24 9.9
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 24 9.9
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 24 9.9
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 24 9.9
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 41.5 bits (93), Expect = 6e-05
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +2
Query: 149 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN----ESLRGGDLATQARVWQW 316
N D KFP K+P F DG L+E+ AIA+Y+A+ +L G +A+V Q+
Sbjct: 38 NFPADLAAKFPLQKMPVFVGKDG-FPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQY 96
Query: 317 ASWSDSEL 340
S+++SEL
Sbjct: 97 CSFTNSEL 104
>SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 220
Score = 29.9 bits (64), Expect = 0.20
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = +2
Query: 38 GXLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 217
G LY++ N R L A+ V + + S D KFP K+P F ADG
Sbjct: 4 GTLYSFKTNTRTVCLLELAKLLDLQVDLVETYPH---KFSADLAAKFPLQKLPVFIGADG 60
Query: 218 KVLLTESNAIAYY 256
L+E AI Y
Sbjct: 61 -FELSEVIAIVKY 72
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 27.1 bits (57), Expect = 1.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +2
Query: 56 PENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTE 235
P F++ KA + QY+ +FG +K ++F K+ ++ F S + +L+
Sbjct: 553 PNYFKSLKAELNRQYAAAVNSGTRPLLFGSLSKYQNFTKEKLESEIVRF-SFEHSILINT 611
Query: 236 SN 241
SN
Sbjct: 612 SN 613
>SPBC16E9.19 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 101
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 352 LCLGLPLPWVSCNSTNRMLNVQSLNLL 432
+CLGL +PW N N L V L L+
Sbjct: 70 VCLGLHVPWTDDNEKNGDLTVVILELV 96
>SPAC9G1.04 |oxa101|oxa1, oxa1-1, oxa1sp1|mitochondrial inner
membrane translocase Oxa101|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 339 YCLLPVLGSSLTLGIMQFNKQN 404
YC+LP++ + L MQ N+ N
Sbjct: 208 YCILPIINAGLMFSGMQMNRAN 229
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 1.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 266 ESLRGGDLATQA--RVWQWASWSDSELLPASCAWVFPYLGYH 385
+S+ G +L R QWASW+ L CA + LG H
Sbjct: 15 QSVSGNNLCADCSTRGVQWASWNLGIFLCLRCATIHRKLGTH 56
>SPAC14C4.04 |B22918-2||hypothetical protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 267
Score = 26.6 bits (56), Expect = 1.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 285 IWLPKPVSGSGHHGLTVNYCL-LPVLGSSLT 374
+W+P PV SG T+ C+ LP G +T
Sbjct: 23 LWVPTPVGRSGRKHRTLKMCIVLPDTGYDVT 53
>SPBC28F2.09 |||transcription factor TFIIA complex large subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 2.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 225 STFPSALSNAGTFPAGNFFKKSSDL 151
+TFP A + GTFP G F S L
Sbjct: 52 ATFPWAQAPVGTFPIGQLFDPVSGL 76
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 236 SNAIAYYVANESLRGGDLATQARVWQWAS 322
S + A Y+ NE+LR G + +R+W AS
Sbjct: 780 STSSAVYIKNENLRKGFVLGISRIWVSAS 808
>SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 158
Score = 25.8 bits (54), Expect = 3.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 276 AEEIWLPKPVSGSGHHGLTV---NYCLLPVLGSSLTLGIMQFNK---QNVERAKSE 425
A +IWL PVSG H+ ++ +C G+ L + +F+K + +E KSE
Sbjct: 101 AHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFSKWFSRPIEFKKSE 156
>SPAC1002.16c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 25.4 bits (53), Expect = 4.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 288 WLPKPVSGSGHHGLTVNYCLLPV 356
+LP +SG G+ L+V Y +PV
Sbjct: 308 FLPAIISGMGYTSLSVQYMTIPV 330
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 25.0 bits (52), Expect = 5.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 409 STFCLLNCMIPKVREDPSTGSRQ 341
S LL C P RE+P+ G R+
Sbjct: 115 SPITLLQCFFPLFRENPTRGVRE 137
>SPBC18H10.16 |||amino acid permease, unknown 9|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1050
Score = 24.6 bits (51), Expect = 7.5
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 251 KRWHCFQLGALFHRHFRMQALFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYK 72
K W G ++H+ ++ Q +R W QI + ++S N++R K
Sbjct: 523 KNWGDVSQGIIYHQ---LRKYLLQTNKARENIKFWRPQILLLINNPNRSENVIRFCNSLK 579
Query: 71 RGS 63
+GS
Sbjct: 580 KGS 582
>SPCC830.10 |||nucleoside triphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 188
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -2
Query: 380 TQGKGRPKHRKQAVVHCQTMMPTARHGLG*PDLLRGDFH 264
T+G G+P H + ++ Q + P +G G + + + H
Sbjct: 116 TKGPGKPIHLFEGILDGQVVPPRGSNGFGWNSIFQPNGH 154
>SPCC622.19 |jmj4|mug149|Jmj4 protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 473
Score = 24.6 bits (51), Expect = 7.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 35 PGXLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDF 166
PG + P ++ +A G+DV +A N+ F + EDF
Sbjct: 382 PGDMLYLPASWFHEVTSSSASSGGSDVHIAFNYWFHPPDNLEDF 425
>SPAC20G4.04c |hus1||checkpoint clamp complex protein
Hus1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 287
Score = 24.2 bits (50), Expect = 9.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 93 HNIPGLM*K*HRISYLARPTSPKTS*RSFLPE 188
HNIP + +S + PT+P+ FLP+
Sbjct: 125 HNIPVRVLSQSYVSVIKEPTAPEPDCHIFLPQ 156
>SPBC725.10 |||tspO homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 24.2 bits (50), Expect = 9.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 251 YYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGY 382
Y +A L DL + W + + L P + W+ PYL +
Sbjct: 106 YGLAKPKLALADLGILTGLVGWLAKTWWPLAPTASKWLIPYLAW 149
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 24.2 bits (50), Expect = 9.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 116 KVAPNFVFGETNKSEDFLK 172
K+ P+ F E + SEDFLK
Sbjct: 52 KLRPDNEFAEVHNSEDFLK 70
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 24.2 bits (50), Expect = 9.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 347 QAVVHCQTMMPT 312
Q V HC TMMPT
Sbjct: 1163 QMVFHCTTMMPT 1174
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 24.2 bits (50), Expect = 9.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 38 GXLYTYPENFRAYKALIAAQYSG-TDVKVAPNFV-FGE 145
G +YT E+FRA K+L S T V+ FV FGE
Sbjct: 331 GSVYTIQESFRAEKSLTRRHLSEFTHVEFELPFVNFGE 368
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,120,583
Number of Sequences: 5004
Number of extensions: 44253
Number of successful extensions: 143
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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