Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_K20
(394 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 26 1.8
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 3.2
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 25 4.2
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 25 4.2
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 24 7.3
SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyce... 24 7.3
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 24 9.7
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 24 9.7
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 24 9.7
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 24 9.7
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 1.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 28 VNIKLFLYFRVDKDFQXRVFKVASTCIK 111
+N++LFLY R+ ++ V K ++C K
Sbjct: 426 INLELFLYLRLSQNDIDNVVKFLTSCYK 453
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 3.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 174 RHLSAPAPTQFLLLKSFYSITLNTS 100
+HL A A + FLL +FY + LN S
Sbjct: 335 KHLLATAVSWFLLDIAFYGVNLNQS 359
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.0 bits (52), Expect = 4.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 123 YSITLNTSRSNLKNSXLEILINSKIKK*FNVHTYREVF 10
Y TLN ++LKN+ +E N+ +K+ +TY +F
Sbjct: 38 YKQTLNDRLTSLKNNFVEENDNAVLKEEPGKYTYMSLF 75
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 25.0 bits (52), Expect = 4.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 159 VPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFLRQFPYSSKGNLV 332
+ + VLG + H + +H R PKQ +++ P L F + P KG+ V
Sbjct: 921 IRVRVLGIHDSRNHKFLPISH--RVSPKQFLELSVRPSILNMEPFSMKEPQFKKGDEV 976
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 359 CXLRGLIIQYQITLRTVRELS*KSRFFQTKGVLEYIDNL 243
C R +IQYQI+ ++++ + T +LEY+ +L
Sbjct: 432 CLGRTNVIQYQISRLVLKDIFFNLQIGVTFNILEYLRHL 470
>SPBC1271.12 |kes1||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 388
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +3
Query: 249 VDVFENPFCLEKSGFLRQFPYSSKGNLVLNDQAAKXAVVN 368
+++ + + + SG+L YS KG K +VN
Sbjct: 212 IELGKKSYIISTSGYLTTIEYSGKGYFTGKKNTFKATIVN 251
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 126 FYSITLNTSRSNLKNSXLEILINSKI--KK*FNV 31
F S+ ++ S S +KN ++++NS++ KK F +
Sbjct: 16 FDSVAVSISASTMKNELDKLVLNSRVSDKKTFGI 49
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 23.8 bits (49), Expect = 9.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1
Query: 307 GNCLRNPDFSRQKGFSNTSTICFGGSL*KWVK--VIARCSWVKVRPKTLIGTGPNTV 143
G L+ F + + + S ICF S+ WV VI V V K+ PN +
Sbjct: 217 GCALQRDIFLHGRMYLSESHICFNSSIFGWVTNIVIPVTEIVSVEKKSTAVVFPNAI 273
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 243 QIVDVFENPFCLEKSGFLRQFP 308
Q VD F NP + +GFL+Q P
Sbjct: 300 QPVDFFGNPVQPQPTGFLQQQP 321
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 159 VPISVLGRTLTHEHLAMTFTHFYREPPKQIVD 254
+PI+V LT EH+++ H Y + ++ D
Sbjct: 799 IPITVNLSHLTVEHMSIVLRHVYSDLKVELFD 830
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,534,890
Number of Sequences: 5004
Number of extensions: 29327
Number of successful extensions: 62
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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