Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_K20
         (394 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050411-1|AAH50411.1|  349|Homo sapiens phosphotriesterase rela...    65   9e-11
BC015092-1|AAH15092.1|  349|Homo sapiens phosphotriesterase rela...    65   9e-11
AL360230-2|CAH73146.1|  349|Homo sapiens phosphotriesterase rela...    65   9e-11
AF212237-1|AAK14923.1|  349|Homo sapiens HPHRP protein.                65   9e-11
X06323-1|CAA29639.1|  348|Homo sapiens protein ( Human MRL3 mRNA...    30   2.4  
CR456720-1|CAG33001.1|  348|Homo sapiens MRPL3 protein.                30   2.4  
BC003375-1|AAH03375.1|  348|Homo sapiens mitochondrial ribosomal...    30   2.4  
AB209629-1|BAD92866.1|  843|Homo sapiens myosin VIIA variant pro...    29   5.5  

>BC050411-1|AAH50411.1|  349|Homo sapiens phosphotriesterase related
           protein.
          Length = 349

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 117 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 296
           ++ ++ KV+TVLG V  S LGRTLTHEHLAMTF   Y  PP     + + P  ++   ++
Sbjct: 1   MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60

Query: 297 RQFPYSSKGNLVLNDQAAKXAVVNDVIAYK 386
           ++  YS K NL LN +    A+  +++ +K
Sbjct: 61  QKNAYSHKENLQLNQET--EAIKEELLYFK 88


>BC015092-1|AAH15092.1|  349|Homo sapiens phosphotriesterase related
           protein.
          Length = 349

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 117 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 296
           ++ ++ KV+TVLG V  S LGRTLTHEHLAMTF   Y  PP     + + P  ++   ++
Sbjct: 1   MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60

Query: 297 RQFPYSSKGNLVLNDQAAKXAVVNDVIAYK 386
           ++  YS K NL LN +    A+  +++ +K
Sbjct: 61  QKNAYSHKENLQLNQET--EAIKEELLYFK 88


>AL360230-2|CAH73146.1|  349|Homo sapiens phosphotriesterase related
           protein.
          Length = 349

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 117 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 296
           ++ ++ KV+TVLG V  S LGRTLTHEHLAMTF   Y  PP     + + P  ++   ++
Sbjct: 1   MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60

Query: 297 RQFPYSSKGNLVLNDQAAKXAVVNDVIAYK 386
           ++  YS K NL LN +    A+  +++ +K
Sbjct: 61  QKNAYSHKENLQLNQET--EAIKEELLYFK 88


>AF212237-1|AAK14923.1|  349|Homo sapiens HPHRP protein.
          Length = 349

 Score = 64.9 bits (151), Expect = 9e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 117 LNKMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYREPPKQIVDVFENPFCLEKSGFL 296
           ++ ++ KV+TVLG V  S LGRTLTHEHLAMTF   Y  PP     + + P  ++   ++
Sbjct: 1   MSSLSGKVQTVLGLVEPSKLGRTLTHEHLAMTFDCCYCPPPPCQEAISKEPIVMKNLYWI 60

Query: 297 RQFPYSSKGNLVLNDQAAKXAVVNDVIAYK 386
           ++  YS K NL LN +    A+  +++ +K
Sbjct: 61  QKNAYSHKENLQLNQET--EAIKEELLYFK 88


>X06323-1|CAA29639.1|  348|Homo sapiens protein ( Human MRL3 mRNA
           for ribosomal protein L3 homologue ( MRL3 =  mammalian
           ribosome L3 ).  ).
          Length = 348

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 123 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 260
           K TSK         +SV G+T++    A +   FYRE   PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179


>CR456720-1|CAG33001.1|  348|Homo sapiens MRPL3 protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 123 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 260
           K TSK         +SV G+T++    A +   FYRE   PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179


>BC003375-1|AAH03375.1|  348|Homo sapiens mitochondrial ribosomal
           protein L3 protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 123 KMTSKVETVLGPVPISVLGRTLTHEHLAMTFTHFYRE---PPKQIVDVF 260
           K TSK         +SV G+T++    A +   FYRE   PPKQ V +F
Sbjct: 131 KYTSKENCNGKMATLSVGGKTVSRFRKATSILEFYRELGLPPKQTVKIF 179


>AB209629-1|BAD92866.1|  843|Homo sapiens myosin VIIA variant
           protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +3

Query: 201 LAMTFTHFYREPPKQIVDVFENPFCLEKSGFLRQFPYSSKGNLVLNDQAAKXAVVN 368
           L +TF    R+  K +V + +NP   E+SGFL      +KG+L++ D      V+N
Sbjct: 209 LVVTFLEGLRKRSKYVVALQDNPNPGEESGFLS----FAKGDLIILDHDTGEQVMN 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,591,750
Number of Sequences: 237096
Number of extensions: 1053142
Number of successful extensions: 1675
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)