Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_K07
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 194 2e-49
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 194 2e-49
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 194 2e-49
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 194 2e-49
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 194 2e-49
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 194 2e-49
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 192 7e-49
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 160 3e-39
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 2e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 48 2e-05
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 194 bits (474), Expect = 2e-49
Identities = 88/142 (61%), Positives = 103/142 (72%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKR 186
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 192 bits (469), Expect = 7e-49
Identities = 87/142 (61%), Positives = 102/142 (71%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 353 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGA 532
AY TG EYNVE +D P AF CYLD GL RTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 533 RVFGAMXGAVDGGLNVPHSIKR 598
+VFGA+ GAVDGGL++PHS KR
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKR 179
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 160 bits (389), Expect = 3e-39
Identities = 73/125 (58%), Positives = 87/125 (69%)
Frame = +2
Query: 212 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 391
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 392 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLPRTTTGARVFGAMXGAVDGG 571
EYNVE +D P AF CYLD GL RTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 572 LNVPH 586
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 2e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 173 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 352
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 353 A 355
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 61 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 168
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 48.4 bits (110), Expect = 2e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2
Query: 518 TTTGARVFGAMXGAVDGGLNVPHSIKR 598
TTTG +VFGA+ GAVDGGL++PHS KR
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKR 27
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,442,141
Number of Sequences: 237096
Number of extensions: 1908918
Number of successful extensions: 3381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3372
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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