Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_J24
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 191 1e-48
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 191 1e-48
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 191 1e-48
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 191 1e-48
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 90 3e-18
BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sortin... 29 6.2
BC050442-1|AAH50442.1| 264|Homo sapiens homeobox C4 protein. 29 6.2
BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sortin... 29 6.2
BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sortin... 29 6.2
AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens ... 29 6.2
AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein. 29 6.2
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 191 bits (465), Expect = 1e-48
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 6/119 (5%)
Frame = +2
Query: 38 MAD-QTEKAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKC 199
MAD QTE+A+QKQ T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 200 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 119
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 119 DVQIGDIVTVGECRPLSKT 137
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 90.2 bits (214), Expect = 3e-18
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +2
Query: 245 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRE 376
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR+
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRD 44
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +3
Query: 375 NVEIGDIVTIGECRPLSKT 431
+V+IGDIVT+GECRPLSKT
Sbjct: 44 DVQIGDIVTVGECRPLSKT 62
>BC098386-1|AAH98386.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 20 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 127
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC050442-1|AAH50442.1| 264|Homo sapiens homeobox C4 protein.
Length = 264
Score = 29.5 bits (63), Expect = 6.2
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 260 KMQRTIVIRRDYLHYLPK--YNRFEKRHRNMSVHLSPCFRERGDW*YCNDRRMQTFVQNR 433
K RT R+ L + YNR+ R R + + S C ER + +RRM+ +R
Sbjct: 157 KRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWKKDHR 216
Query: 434 FKNSK 448
N+K
Sbjct: 217 LPNTK 221
>BC014128-1|AAH14128.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 20 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 127
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>BC009747-1|AAH09747.1| 336|Homo sapiens vacuolar protein sorting
26 homolog B (S. pombe) protein.
Length = 336
Score = 29.5 bits (63), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 20 FSLSSKMADQTEKAFQKQATVFLNRKGGMKRKDMRH 127
+ L+ + D+ E+ + KQ V L RKG + RK M H
Sbjct: 270 YYLNLVLIDEEERRYFKQQEVVLWRKGDIVRKSMSH 305
>AK000368-1|BAA91116.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ20361 fis, clone HEP16789. ).
Length = 251
Score = 29.5 bits (63), Expect = 6.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 421 KGLHSPIVTISPISTFPEARRQ 356
KG+H P + I+P+ST P R+
Sbjct: 126 KGIHGPFLVIAPLSTIPNWERE 147
>AB037837-1|BAA92654.1| 1967|Homo sapiens KIAA1416 protein protein.
Length = 1967
Score = 29.5 bits (63), Expect = 6.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 421 KGLHSPIVTISPISTFPEARRQ 356
KG+H P + I+P+ST P R+
Sbjct: 251 KGIHGPFLVIAPLSTIPNWERE 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,604,996
Number of Sequences: 237096
Number of extensions: 1598549
Number of successful extensions: 6805
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6796
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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