Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_J15
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   2.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   5.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   9.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.7  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
 Frame = +3

Query: 357 HPHYEHYEARERAYSVYKMYGRFSAEEIYEELNKLK--VTYVVVETKYCY 500
           HP ++     + A   ++ YG+   EE  +   +++    +      YCY
Sbjct: 173 HPFWDDQRVEQEAKRRFEKYGQLFMEETLKAAKRMRPAANWGYYAYPYCY 222


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 504 FRSSILFPQRHTSLSI 457
           FR+ + FPQR T  ++
Sbjct: 300 FRNGLAFPQRETGATV 315


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 504 FRSSILFPQRHTSLSI 457
           FR+ + FPQR T  ++
Sbjct: 300 FRNGLAFPQRETGATV 315


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 447 PHRSPRLRNARTFYRQN 397
           PHR P+L+    F ++N
Sbjct: 274 PHRIPQLQEVSEFLKKN 290


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 336  TRRPVVAHPHYEHYEARERAYSVYKMYGRFS 428
            T  P V HP      +R  + S+ +  GR+S
Sbjct: 1758 TMGPPVGHPTNASAHSRSGSQSMPRQNGRYS 1788


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 168  WSLVNTMYLNVTKELSHIGEFSDP 239
            W++ N  Y+ V   ++  GE  DP
Sbjct: 1109 WTMDNERYVKVDMYMNLEGEQKDP 1132


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 261 WIMRETSPSAAFAGSMPLLATVL 329
           W +   +P+A F G M    T L
Sbjct: 336 WFLTRQNPAAFFRGMMQAWMTAL 358


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +3

Query: 147 VIIICNIWSLVNTMYLNVTKELSHIG 224
           +I++C +++++         E  HIG
Sbjct: 826 LIVVCTVYAVLTRKIPEAFNESKHIG 851


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,719
Number of Sequences: 438
Number of extensions: 2696
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)