Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_J04
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical pr...   125   3e-29
Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U80029-19|AAB37598.1|  139|Caenorhabditis elegans Hypothetical p...    27   8.8  
AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical...    27   8.8  

>Z70686-5|CAA94613.1|  135|Caenorhabditis elegans Hypothetical
           protein R10H10.6 protein.
          Length = 135

 Score =  125 bits (301), Expect = 3e-29
 Identities = 59/114 (51%), Positives = 77/114 (67%)
 Frame = +3

Query: 300 SVLPFFLEGEVVKGFGRGSKELGCPTANYPLEVVKSLPKGLEPGVYYGWAQVDTGPVYKM 479
           ++LP+   GEVV+GFGRG KELGCPTAN    VV  LP+GL  GVY+G A++D G  YKM
Sbjct: 2   NLLPYQFVGEVVRGFGRGGKELGCPTANMDGTVVNGLPEGLPVGVYFGTAKLD-GKSYKM 60

Query: 480 VANIGWCPFYQNKEMSVETHIMHNFQGDFYGSNLKIALIGYLRGEKNFNCLDAL 641
             +IGW P YQN++ +VE H++     DFYG  L   +IG++R  K+F  LD L
Sbjct: 61  AMSIGWNPQYQNEKKTVELHLIDYSGSDFYGKTLSAVIIGFIREMKSFESLDEL 114


>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 524 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 423
           H+FI V    SY   H   ++   + PS+I+TW+
Sbjct: 28  HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 61


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 524 HLFILVKRTPSYICYHLIYRSCVNLSPSIINTWL 423
           H+FI V    SY   H   ++   + PS+I+TW+
Sbjct: 35  HVFIFVHTFMSYAMLHATRKTLSTVKPSLIHTWI 68


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 468 VYKMVANIGWCPFYQNKEMSVETHIMHN 551
           +Y ++  + W PF+Q+   S  TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 468 VYKMVANIGWCPFYQNKEMSVETHIMHN 551
           +Y ++  + W PF+Q+   S  TH+ HN
Sbjct: 411 LYNLLPQVDWVPFFQSIAPSDLTHLFHN 438


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
            E01G6.1 protein.
          Length = 1391

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 312  FFLEGEVVKGFGRGSKELGCPTANYPL 392
            F + G  V GFG  + + GCP  + PL
Sbjct: 1103 FNMGGGAVPGFGNQASQSGCPLGSRPL 1129


>U80029-19|AAB37598.1|  139|Caenorhabditis elegans Hypothetical
           protein T20D4.19 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 267 MKIFFQLRKMSSVLPFFLEGEVVKGFGRGSKELGCPTAN 383
           MK+F     +S+VLP   EG  V    R  K+  C TA+
Sbjct: 1   MKLFLLFITISTVLPSLAEGACVCPATRKVKDSNCTTAD 39


>AF106577-14|AAC78187.1|   68|Caenorhabditis elegans Hypothetical
           protein F46F5.8 protein.
          Length = 68

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +3

Query: 378 ANYPLEVVKSLPKGLEP 428
           ANYP  VV S PKGL P
Sbjct: 35  ANYPRAVVDSHPKGLRP 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,841,629
Number of Sequences: 27780
Number of extensions: 322303
Number of successful extensions: 711
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)