Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_J02
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 169 1e-42
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 31 0.36
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 30 1.1
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical ... 29 1.9
AL021487-7|CAA16359.1| 221|Caenorhabditis elegans Hypothetical ... 29 2.5
AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical ... 28 3.3
AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical ... 28 3.3
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 169 bits (411), Expect = 1e-42
Identities = 75/124 (60%), Positives = 103/124 (83%)
Frame = +2
Query: 104 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 283
+VKK+ +F RH+SDRY ++ +WRKP+GIDNRVRRRF+G MP IG+GS+++TR +LP
Sbjct: 11 VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70
Query: 284 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRS 463
NG++KVLV NVK+L++L+MQ+ KY EI HGVS+K RK IVERA QL+I++TN ARLR+
Sbjct: 71 NGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLRT 130
Query: 464 QENE 475
+E+E
Sbjct: 131 EESE 134
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.36
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +2
Query: 92 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 265
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 266 TRHMLPNGFRKV--LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 439
+ L +K+ ++ ++ ++A +++ K I +R +L +T
Sbjct: 61 AEYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELT 120
Query: 440 NAAARLRSQENE 475
+ +NE
Sbjct: 121 GKTQFVAPLQNE 132
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 41 SLSRFLKKHTTMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 214
+L + KKH T A++P +R TI+ +R K ++ DRY K K+ + K + +RR
Sbjct: 382 ALKKKKKKHMT-ALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = +2
Query: 92 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 265
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 266 TRHMLPNGFRKV--LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 439
+ L +K+ ++ ++ ++A +++ K I +R +L +T
Sbjct: 61 AEYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELT 120
Query: 440 NAA 448
A
Sbjct: 121 FVA 123
>AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical
protein Y47H10A.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 224 QYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQN 346
QYLM NI R P+GF K L+ + L+I QN
Sbjct: 213 QYLMNNIDLKYGLLIRCWHPSGFDKELLSGIPRLDIFYAQN 253
>AL021487-7|CAA16359.1| 221|Caenorhabditis elegans Hypothetical
protein Y45F10B.12 protein.
Length = 221
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 5 FSLLVRPCHRXGSLSRFLKKHTTMAIRPVYRPTIVKKRTKRFIRH 139
F + V CH+ G ++ K+ + V++ T+ + +T FI H
Sbjct: 79 FDISVMECHKEGFFTKDDLKNMKCQLISVHQNTLTENQTNEFIHH 123
>AF002196-9|AAV34797.1| 475|Caenorhabditis elegans Hypothetical
protein C09D4.1b protein.
Length = 475
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 129 NLFVLFLTIVGL*TGLIAIVVCFFKKRDSEP 37
+L LFL L T ++A+V+CFF R + P
Sbjct: 203 DLNTLFLGSAVLNTSILALVICFFTARPAVP 233
>AF002196-8|AAB53976.2| 586|Caenorhabditis elegans Hypothetical
protein C09D4.1a protein.
Length = 586
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 129 NLFVLFLTIVGL*TGLIAIVVCFFKKRDSEP 37
+L LFL L T ++A+V+CFF R + P
Sbjct: 314 DLNTLFLGSAVLNTSILALVICFFTARPAVP 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,151,621
Number of Sequences: 27780
Number of extensions: 225065
Number of successful extensions: 694
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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