Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_I19
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 69 3e-12
L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical pr... 68 5e-12
L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical pr... 68 5e-12
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 57 7e-09
Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical ... 54 9e-08
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 33 0.10
Z71259-2|CAA95790.1| 336|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 30 1.3
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +2
Query: 182 VKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWSFICHHGA 361
+KI + YE+LCP +KFI QL V+ F+G + +++VP+G S + DG SF C+HG
Sbjct: 141 IKITLIYEALCPYCQKFIANQLGSVFNQFQGQLILELVPWGNSRIMR-DG--SFSCNHGQ 197
Query: 362 DECYGNKVQACVL 400
EC N++Q+CV+
Sbjct: 198 KECDANRLQSCVI 210
>L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical
protein C02D5.2b protein.
Length = 263
Score = 67.7 bits (158), Expect = 5e-12
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 161 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGK 334
K+ ++ VK+ VY E+ CPD+ +F QL W L +++ ++P+GK+ +
Sbjct: 72 KEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGND 131
Query: 335 WSFICHHGADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXTXPDKSLDTCLTQVDKMS 514
+ C HG EC N++ CV+ DR + V+C+ D+++ C+T+ + S
Sbjct: 132 FECQCQHGPTECQINQLMNCVI-DRFGFPHRYLPGVLCMQGKYSLDEAM-KCVTE-NYPS 188
Query: 515 ESDKLKRCASXEQG 556
E ++++ CAS +G
Sbjct: 189 EYERMRECASGTRG 202
>L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical
protein C02D5.2a protein.
Length = 323
Score = 67.7 bits (158), Expect = 5e-12
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Frame = +2
Query: 161 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGL--VKVKMVPYGKSTHDKVDGK 334
K+ ++ VK+ VY E+ CPD+ +F QL W L +++ ++P+GK+ +
Sbjct: 132 KEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGND 191
Query: 335 WSFICHHGADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXTXPDKSLDTCLTQVDKMS 514
+ C HG EC N++ CV+ DR + V+C+ D+++ C+T+ + S
Sbjct: 192 FECQCQHGPTECQINQLMNCVI-DRFGFPHRYLPGVLCMQGKYSLDEAM-KCVTE-NYPS 248
Query: 515 ESDKLKRCASXEQG 556
E ++++ CAS +G
Sbjct: 249 EYERMRECASGTRG 262
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 64.1 bits (149), Expect = 6e-11
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 167 TEDHKVKIAVYYESLCPDSKKFITTQLAP-VWRDFRGLVKVKMVPYGKSTHDKVDGKWSF 343
T + K+ I V E+LCPD + F+T QL P V+++F V +++VP+G + KV +
Sbjct: 71 THNQKINITVLIEALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNA---KVLEDGTI 127
Query: 344 ICHHGADECYGNKVQACVLKDRNLXDTEXMEIVICL 451
C HG +EC NK + C + ++ D + + C+
Sbjct: 128 KCQHGEEECSINKFEGCFID--SMQDQSPLPTLSCI 161
>Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical
protein R07E5.4 protein.
Length = 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Frame = +2
Query: 131 LMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKS 310
L+LL + + +V + ++ ES CP K + Q+ P + + G++ +++VP+GK
Sbjct: 2 LVLLVAFLFPVLLQAQQVNVTIFTESQCPYCTKLLREQIWPFYVNRPGIMNLQIVPFGKG 61
Query: 311 --THDKVDGKWSFICHHGADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXTXPDKSLD 484
T+D + + C HGA EC N++Q C + + + +V CL T +
Sbjct: 62 DCTYD-YNRNFHCTCMHGATECDLNRLQNCAI---SYFPRRHLGLVTCLQGLTTLREGFS 117
Query: 485 TCLTQVDKMSESDKLKRCASXEQG 556
CL+++ ++ KL CA+ + G
Sbjct: 118 KCLSRLSPNTQR-KLIECATTQTG 140
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 57.2 bits (132), Expect = 7e-09
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Frame = +2
Query: 182 VKIAVYYESLCPDSKKFITTQLAPVWRDFR--GLVKVKMVPYG-KSTHDKVDGKWSFICH 352
+ I + ESLCPD+ ++ + PVW + + + P+G S + C
Sbjct: 74 INIEFFGESLCPDTTRYFRNHIMPVWTSLQASSTINITYHPFGLASCRRSAETGIRCNCQ 133
Query: 353 HGADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXTXPDKSLDTCLTQVDKMSESDK-- 526
HG EC N +QACV+ + + IV C+ ++D C+ + D+
Sbjct: 134 HGPAECQLNMLQACVISTLQVPQL-YLPIVNCMQGKNKFSSAVDDCIVNFRPRPDLDENF 192
Query: 527 LKRCASXEQG 556
+ RCA + G
Sbjct: 193 MARCAQSQLG 202
>Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical
protein ZK669.3 protein.
Length = 218
Score = 56.8 bits (131), Expect = 1e-08
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = +2
Query: 119 LVCFLMLLCYVVAKKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDF--RGLVKVKM 292
L+ F+ + Y K D V I + E C D+ ++ P+WR G +
Sbjct: 11 LILFITKISYAKDKGANGD-MVNIVAFGEGRCSDTSYWMKWHWLPMWRMLGSTGRINFDY 69
Query: 293 VPYG-KSTHDKVDGKWSFIC--HHGADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXT 463
PYG K+T + +C HHG EC N++QACV++ + + ME+V C+
Sbjct: 70 HPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPNFE-DYMEVVTCIQGKQ 128
Query: 464 XPDKSLDTCLTQVDKMSESDKLKRCASXEQG 556
+ + C K+ + K+ CA G
Sbjct: 129 NISMAAEVCFEGPTKLDRT-KMMECAESRHG 158
>AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical
protein Y18D10A.2 protein.
Length = 220
Score = 53.6 bits (123), Expect = 9e-08
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Frame = +2
Query: 188 IAVYYESLCPDSKKFITTQLAPVWRDFRGLVK--VKMVPYGKST-HDKVDGKWSFICHHG 358
+ V+ S CPD+ KFI QL P +++++G + +K+ + T +VDGK+ C HG
Sbjct: 39 VEVFGISRCPDTSKFIHNQLVPFYQNYKGNLSDGLKLDFHAVPTGGHQVDGKYVNRCLHG 98
Query: 359 ADECYGNKVQACVLKDRNLXDTEXMEIVICLMNXTXPDKSLDTCLTQVDKMSESDKLKRC 538
A EC NK+Q C K + + C+ T L CL + E ++ C
Sbjct: 99 ALECALNKLQMCSKKH---IKQDWLVTAGCIQGKTAYSAGL-KCLPDTE---EGKIVQNC 151
Query: 539 ASXEQG 556
A E+G
Sbjct: 152 AESEEG 157
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +2
Query: 212 CPDSKKFITTQLAPVWRDF---RGLVKVKMVPYGKSTHDKV-DGKWSFICHHGADECYGN 379
C + K+ TQLAP + +G +KMV + S K +G C +G EC N
Sbjct: 44 CALTTKWFRTQLAPFLGNLTAKKGPKNLKMVYHPLSIGQKKGNGTAVATCENGWLECQLN 103
Query: 380 KVQACVLK-DRNLXDTEXMEIVICLMNXTXPDKSLDTCL 493
K+Q C K RN+ D E + ++ C+ K+LD CL
Sbjct: 104 KLQCCTKKYSRNVTDFEILAVLECIQGKQWFGKALD-CL 141
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 221 SKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS---FICHHGA 361
++K TT L P +VK+ PYG +T ++ GKW FI HH A
Sbjct: 150 TRKTTTTTLRPTKPRPMTKPRVKVCPYGWATFNRPSGKWCIKVFIGHHAA 199
>Z71259-2|CAA95790.1| 336|Caenorhabditis elegans Hypothetical
protein F13G3.2 protein.
Length = 336
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -1
Query: 319 VVRALPIRDHFDFDKSSEVPPDG-SQLRRYKLLAVRTKGFVIDRYFDLMVFGFLLRH--D 149
VVRA +++H +D S P G S R ++ L V T I YF ++ F++R
Sbjct: 162 VVRAQSVKEHSTYDLSIYAPFSGFSDTRSFQFLFV-TAAIAIGAYFVPLMSVFVIRKIMI 220
Query: 148 IAEQHQKANQPESLHLVVL 92
+ + H K ++ H +L
Sbjct: 221 VTKAHSKMSENTKRHTRML 239
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Frame = +2
Query: 158 KKKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMV--PYGKSTHDKVDG 331
KK E+H + +S P SK+ ITT L W D VK + G T +DG
Sbjct: 643 KKIVEEHLQALDARGQSKLPASKQKITTYLNVGWDDIAAKVKAILSGGAGGALTERLIDG 702
Query: 332 KW-SFICHHGADECY-GNKVQA 391
K I DE + G KV++
Sbjct: 703 KTKKVITMDNGDEGFMGAKVES 724
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,554,172
Number of Sequences: 27780
Number of extensions: 254466
Number of successful extensions: 768
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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