Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_I18
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    25   0.63 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.9  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   7.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   7.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   7.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   7.8  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   7.8  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 144 LGSKLSASHDTSIFRTPR 91
           L  KL +S DTS+FR P+
Sbjct: 107 LSDKLESSDDTSLFRGPK 124


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 357 QRRLQKK*LQSRSWLRNFASRSYRKNQICD 446
           +++ +KK L     LRN    SY+ N  CD
Sbjct: 122 EQKRRKKSLDDVKILRNDRIDSYKSNLKCD 151


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SKNQQLN*YENFSPEHQNRTNYRQ 26
           S N + + Y N++  + N  NY++
Sbjct: 86  SNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SKNQQLN*YENFSPEHQNRTNYRQ 26
           S N + + Y N++  + N  NY++
Sbjct: 86  SNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SKNQQLN*YENFSPEHQNRTNYRQ 26
           S N + + Y N++  + N  NY++
Sbjct: 86  SNNYKYSNYNNYNNNNYNNNNYKK 109


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 97  SKNQQLN*YENFSPEHQNRTNYRQ 26
           S N + + Y N++  + N  NY++
Sbjct: 86  SNNYKYSNYNNYNNNNYNNNNYKK 109


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 544 GDQQTLCTLLCSWVEIVKFTNVTF 473
           GD      +    +EI+KF N+ F
Sbjct: 222 GDNTKAAVMRLGLMEIIKFVNIFF 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,774
Number of Sequences: 438
Number of extensions: 2624
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)