Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_I17
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 211 6e-56
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 211 6e-56
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 107 1e-24
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 64 1e-11
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 0.001
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.25
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 29 0.44
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 29 0.58
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 28 1.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 27 1.8
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 1.8
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.1
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 26 4.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 26 4.1
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 26 5.4
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 25 7.1
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 25 7.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 7.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 25 9.4
SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual 25 9.4
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 25 9.4
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 211 bits (516), Expect = 6e-56
Identities = 97/146 (66%), Positives = 114/146 (78%)
Frame = +2
Query: 212 PWXQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLC 391
P C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S
Sbjct: 516 PCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTA 575
Query: 392 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWC 571
LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKIWC
Sbjct: 576 LSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWC 635
Query: 572 FGPXGTGPNILVDCSKGVQYLNEIKD 649
FGP TG N++VD +K V YLNEIKD
Sbjct: 636 FGPDTTGANVVVDQTKAVAYLNEIKD 661
Score = 60.9 bits (141), Expect = 2e-10
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 27 GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSP 125
GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSP
Sbjct: 455 GLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSP 487
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 130 VRVAVEPKNPADLPKLVEGLKRLAKSDP 213
V+VAVE KN DLPKLVEGLKRL+KSDP
Sbjct: 489 VQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 211 bits (516), Expect = 6e-56
Identities = 97/146 (66%), Positives = 114/146 (78%)
Frame = +2
Query: 212 PWXQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLC 391
P C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+V+E S
Sbjct: 516 PCVLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTA 575
Query: 392 LSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWC 571
LSKSPNKHNR+FM A+PM + L I+ G VNPRDDFK RAR + +++ +DVT+ARKIWC
Sbjct: 576 LSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWC 635
Query: 572 FGPXGTGPNILVDCSKGVQYLNEIKD 649
FGP TG N++VD +K V YLNEIKD
Sbjct: 636 FGPDTTGANVVVDQTKAVAYLNEIKD 661
Score = 60.9 bits (141), Expect = 2e-10
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 27 GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSP 125
GLVGVDQFLVK+GT+TT + AHNMKVMKFSVSP
Sbjct: 455 GLVGVDQFLVKSGTLTTSEVAHNMKVMKFSVSP 487
Score = 48.0 bits (109), Expect = 1e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 130 VRVAVEPKNPADLPKLVEGLKRLAKSDP 213
V+VAVE KN DLPKLVEGLKRL+KSDP
Sbjct: 489 VQVAVEVKNGNDLPKLVEGLKRLSKSDP 516
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 107 bits (258), Expect = 1e-24
Identities = 50/126 (39%), Positives = 74/126 (58%)
Frame = +2
Query: 233 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 412
EESGEH + G GE++++ L DL ++ I I+ SDPV + ET + S C S +PNK
Sbjct: 635 EESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNK 694
Query: 413 HNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPXGTG 592
NR+ M +P+ G+ DI+ G+VN K + + + Y++D+ +R IW FGP G
Sbjct: 695 KNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRG 754
Query: 593 PNILVD 610
NIL D
Sbjct: 755 TNILRD 760
Score = 40.3 bits (90), Expect = 2e-04
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = +1
Query: 133 RVAVEPKNPADLPKLVEGLKRLAKSDPM 216
+VAVEP NP++LPKL++GL++ KS P+
Sbjct: 602 KVAVEPHNPSELPKLLDGLRKTNKSYPL 629
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 64.5 bits (150), Expect = 1e-11
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +2
Query: 212 PWXQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLC 391
P Q EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YRET D L
Sbjct: 591 PCVQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLA 650
Query: 392 LSK 400
+K
Sbjct: 651 KNK 653
Score = 33.1 bits (72), Expect = 0.035
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 130 VRVAVEPKNPADLPKLVEGLKRLAKSDP 213
VRVA+EP P ++ KLV GL L ++DP
Sbjct: 564 VRVALEPVRPFEMNKLVTGLDMLNQADP 591
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 494 DDFKTRARYLTEKYEYDVTEARK----IWCFGPXGTGPNILVDCSK 619
+ F R L E+ D+ E + I FGP GPNIL D +K
Sbjct: 724 EKFYERLSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTK 769
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +2
Query: 227 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 376
++ ES E I++G GELHLE+ ++ + ++ + + P V++RET++++
Sbjct: 508 LDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFRETLSKK 556
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 290 LKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMP 448
+K LEE+ + +K SD V + ++ + P +++FM PMP
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMP 339
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 29.5 bits (63), Expect = 0.44
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 33 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPXR 131
+GVD F K G + +K+ N+K+ +K+ V+P R
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTPPR 438
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 29.1 bits (62), Expect = 0.58
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +2
Query: 230 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPN 409
+EE+ + A E C++DL++ + K+SD Y T+ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 410 KHNRLFMKAQPMPDGL 457
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 236 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKH 415
E+G+ ++ G G +HL++ + L + V YRET+ + S + NK
Sbjct: 481 ENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVGYRETLIDVSFNSVTLSTENKE 539
Query: 416 N 418
N
Sbjct: 540 N 540
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 281 EICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNK 412
E+C +LE+D I +S +S + A++ DQL S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 1.8
Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Frame = +2
Query: 227 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSP 406
I E+ ++ + L E ++ + E I + + + +++ D +
Sbjct: 419 IAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGS 478
Query: 407 NKHNRLFMKAQPMPDGLPEDI---DEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFG 577
+ + L +P+ EDI +E + R+ + Y + + VT ++ + FG
Sbjct: 479 SNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFG 538
Query: 578 PXGTGPNIL 604
P GTG +L
Sbjct: 539 PPGTGKTLL 547
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.1
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +2
Query: 275 HLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDG 454
HL++CL D +E+ + K + E S +L LSK + + + M
Sbjct: 475 HLKLCLSDSQEELLQLNAKLEKANIVIDEL---NSAKLKLSKQVEEESSMKDDLTEMNQR 531
Query: 455 LPEDID--EGRVNPRDDFKTRARYLTEKYEYD 544
L E I+ E VN +T + T K +Y+
Sbjct: 532 LKEQIESYENEVNSEITSRTLKEFETLKTQYE 563
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 455 LPEDIDEGRVNPRDDFKT 508
LPE IDEG+++ DD KT
Sbjct: 194 LPEKIDEGKLSDVDDGKT 211
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1
Query: 457 QTIRHGLSLHEQTVVLVGRL*E 392
+++RH +SL+E+T + +GRL E
Sbjct: 324 ESVRHLISLNEETWIQIGRLAE 345
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 213 HGCSVLMKNQE-NTLSL 260
H C+VLM N E NTLSL
Sbjct: 123 HSCNVLMNNDEKNTLSL 139
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 580 GAKAPNLTGFGNIVFVLFCKIPSAS 506
G PNL GN +F L ++PS+S
Sbjct: 170 GILPPNLNSIGNKMFSLKSRVPSSS 194
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +2
Query: 551 EARKIWCFGPXGTGPNILVD--CSKGVQYLNE 640
E + GP G+G ++LVD S+ Q +NE
Sbjct: 574 EGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 157 PADLPKLVEGLKRLAKSDPMXAV 225
P D+ KL EGL++L + D + V
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVV 194
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 7.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 468 LMRVA*IPAMTSRLALGILQKSTNTMLPKPVRFGALAPXVPAPTSWSIAPKEFS 629
L RV +P ++S+ L + +P P + AP VP PTS PK S
Sbjct: 1008 LARVPPVPKLSSKAPPVPLPSADAPPIPVP----STAPPVPIPTSTPPVPKSSS 1057
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 42 DQFLVKTGTITTFKNAHNMKVMKFSVS 122
D FLVK G + ++ +N+ FSVS
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVS 108
>SPBC947.04 |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 973
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 375 SSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIHCXHG 211
S T YDTTG+D ++ SS R WS+ P +P ++ I+ G
Sbjct: 117 SDYTSVYYDTTGTDDVVYEYHPSSERHKSTNDTWSTNLPT---NPTTTAIYSTSG 168
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 356 RETVAEESDQLCLSKSPNKHNRLFMKAQP 442
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,693,503
Number of Sequences: 5004
Number of extensions: 54555
Number of successful extensions: 189
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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