Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_I13
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.3  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   3.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   4.3  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              20   10.0 

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 173 PSRHYRSGLR 144
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 236 RWSCLWASGHQAGCRAPGSKAPSRHYR 156
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 236 RWSCLWASGHQAGCRAPGSKAPSRHYR 156
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 236 RWSCLWASGHQAGCRAPGSKAPSRHYR 156
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -3

Query: 418 IVVAAXSLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLASSG 275
           I  AA SL +    ++  L++C    +I    F  +  +TG+ L + G
Sbjct: 72  IFCAAKSLRTPSNMFVVNLAICDFFMMIKTPIFIYNSFNTGFALGNLG 119


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   KFDSHSFGKPLNR 42
           KFD  SFG PL++
Sbjct: 641 KFDKRSFGFPLDK 653


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 4   KFDSHSFGKPLNR 42
           KFD  SFG PL++
Sbjct: 641 KFDKRSFGFPLDK 653


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 207 MARCPQTRPSGVETILSTLSSARPE 281
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 272 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 367
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 366 CFIQNNLLLVKE 401
           CFI NNL+ + E
Sbjct: 121 CFIDNNLMKIFE 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,690
Number of Sequences: 438
Number of extensions: 2825
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)