Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_I10
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 187 3e-47
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 187 3e-47
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 187 3e-47
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 187 3e-47
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 186 8e-47
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 184 3e-46
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 184 3e-46
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 178 1e-44
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 54 4e-07
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.67
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.67
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.67
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 33 0.88
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 33 0.88
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 33 0.88
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.0
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.0
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.0
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.0
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.0
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.0
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.0
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.0
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.0
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.0
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.0
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 3.6
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 3.6
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 3.6
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 3.6
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 3.6
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 3.6
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 3.6
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 3.6
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 3.6
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 3.6
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 3.6
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 3.6
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 3.6
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 30 8.2
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 187 bits (455), Expect = 3e-47
Identities = 89/128 (69%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 186 bits (452), Expect = 8e-47
Identities = 88/128 (68%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 184 bits (447), Expect = 3e-46
Identities = 89/128 (69%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 82 IWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 184 bits (447), Expect = 3e-46
Identities = 88/128 (68%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLPH
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPH 81
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
I+GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SF QAL
Sbjct: 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQAL 141
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 142 GITTKISR 149
Score = 72.9 bits (171), Expect = 9e-13
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +2
Query: 527 SKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
S+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 148 SRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLV 188
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 178 bits (434), Expect = 1e-44
Identities = 87/128 (67%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
Frame = +3
Query: 153 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 332
D+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTMMRKAI+ HL+NNPALEKLLP
Sbjct: 22 DDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLP- 80
Query: 333 IKGNVGFVFTRGDLVXVRDNCWRTS-PAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQAL 509
++GNVGFVFT+ DL +RD PA R GAI P V + NTGLGP SFFQAL
Sbjct: 81 LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQAL 140
Query: 510 SIPTKIQR 533
I TKI R
Sbjct: 141 GITTKISR 148
Score = 48.0 bits (109), Expect = 3e-05
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 89 MGREDKATWKSNYFVKIIQLLGRVPKMF 172
M RED+ATWKSNYF+KIIQLL PK F
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCF 28
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 54.0 bits (124), Expect = 4e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2
Query: 569 KPGDKVGASEATLLNMLNISPFSYGLV 649
K GDKVGASEATLLNMLNISPFS+GLV
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLV 28
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.67
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 218 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 331
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 218 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 331
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 33.1 bits (72), Expect = 0.88
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 218 PYLATWLQYRAHGKKHNDAQSHQRPPGQQSSPRETVAT 331
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 3.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 204 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 356
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 29.9 bits (64), Expect = 8.2
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +1
Query: 184 PITWARNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLA---- 351
P+T R++S + + SW+K++ + +T +T Q S HT+ T A
Sbjct: 2226 PVTAPSTPSGRAISPTQS--TSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPTAR 2283
Query: 352 SCSPAETSLXSVTTVGEXXXXXXXXXPLAHCQSSXPATT 468
+ S TS SV T P+ ++ ATT
Sbjct: 2284 TTSAPTTSTTSVPTTSTISGPKTTPSPVPTTSTTSAATT 2322
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,186,281
Number of Sequences: 237096
Number of extensions: 2401936
Number of successful extensions: 8900
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 8590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8880
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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