Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_I10
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   158   4e-39
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    31   0.94 
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  158 bits (383), Expect = 4e-39
 Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
 Frame = +3

Query: 150 WDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLP 329
           ++EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL  NP+LEKLLP
Sbjct: 21  FEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLP 80

Query: 330 HIKGNVGFVFTRGDLVXVRDNCWRT-SPAPXRPGAIGPLSVVIXGHNTGLGPXXNSFFQA 506
           HI  NVGFVFT+ DL  +R         AP + GAI P  V +   NTG+GP   SFFQA
Sbjct: 81  HIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQA 140

Query: 507 LSIPTKIQR 533
           L IPTKI R
Sbjct: 141 LQIPTKIAR 149



 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 31/45 (68%), Positives = 40/45 (88%)
 Frame = +2

Query: 515 PYQDSKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLV 649
           P + ++GTIEI+NDVH++K GDKVGASE+ LLNML ++PFSYGLV
Sbjct: 144 PTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLV 188



 Score = 39.1 bits (87), Expect = 0.003
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +2

Query: 89  MGREDKATWKSNYFVKIIQLLGRVPK 166
           M RED++TWK+NYF K+++L    PK
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPK 26


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 147 SWDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEK 320
           S D+Y   FI    N+ S +   IR   + +S    GKN ++  A+     +  A  L K
Sbjct: 33  SVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHK 92

Query: 321 LLPHIKGNVGFVFT 362
               +KG  G +FT
Sbjct: 93  ASAILKGQCGLMFT 106


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +2

Query: 44  LVLKFHRSPYATLSRMGREDKATWKSNYFVK 136
           L+ K   S ++ +SR+ +EDK +  SN+++K
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,103,678
Number of Sequences: 27780
Number of extensions: 337579
Number of successful extensions: 986
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)